Pedobacter sp. WC2423: AB3G38_04290
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Entry
AB3G38_04290 CDS
T10715
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
pedo Pedobacter sp. WC2423
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pedo03000
]
AB3G38_04290
Transcription factors [BR:
pedo03000
]
Prokaryotic type
Helix-turn-helix
LacI family
AB3G38_04290
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_38
HTH_AraC
Sigma54_DBD
HTH_3
HTH_Crp_2
HTH_23
Sigma70_r4
HTH_18
MarR_2
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
XDC12069
LinkDB
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Position
complement(1114458..1115468)
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AA seq
336 aa
AA seq
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MFVPSTLKDIASALGYSTSTISRALRDTYEISPETKKIIREYAQKINYRPNPIALSLKER
RSKSIGVVVAEVANHYFSQAINGIESIAYDRGYHVIITQTHESYEREKINIHHLASRSVD
GLLVSLSAETSDTSHLQDLHQKGLPMVFFDRVAEEIITHKVIANNEKGAFQATEHLIHNG
YKRIAHLTSSAHLSISIERLEGYKNALAKHHIPFEQDYVKYCPHGGMFYQETENAVKELM
NLKEKPDAIFVAGDRLSIDCLMVFKNLNIKIPQDIVITGFSNSDVLDLMNPSLTSIRQPA
FEIGQIATQMLLKVIESKYPVYDFEKKILDTSLFVR
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtaccctctaccttaaaagatatagccagtgctctgggctattcaacttctacg
atttccagggctttacgtgatacttatgagatcagcccggaaaccaaaaagattatccgg
gagtatgcacagaagataaattaccgccctaatcctattgcactgagcttaaaggaacgc
cggagcaaatcaattggtgtggtagtggctgaagttgccaaccattacttttctcaggcc
attaacgggattgaatctattgcttatgaccgtggttaccatgtaatcattacgcagacc
catgagtcttatgagcgtgaaaaaattaacatccatcatctggcttccagatctgtagat
ggcttactggtttctttatctgcggaaacaagtgatacttcacatcttcaggatttgcat
caaaaaggattaccaatggtgttttttgacagggttgcagaagaaataatcacccataaa
gttatagctaacaatgaaaaaggagcttttcaagccacagagcatctgattcataatgga
tataaaagaattgcacatttaacgagttctgcgcatttatcaattagtatagaacggctg
gagggttacaaaaacgcattggccaagcatcatatcccttttgagcaggactatgttaaa
tattgcccgcatggtgggatgttttatcaggaaacagaaaatgcagtcaaagaattgatg
aacctgaaggaaaaacctgatgcaatttttgtagcaggtgaccggttaagtattgattgc
ctgatggtatttaagaatttaaatatcaaaattccgcaggatattgtgattacaggattt
agtaattctgatgtcctggacctgatgaatccttcgctgacttctatccggcagcctgcc
tttgaaatcggacagatagccactcaaatgctgcttaaagtcatagaaagtaagtatcca
gtatatgatttcgaaaaaaagatactggatacaagcttatttgtaaggtaa
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