Pedobacter sp. WC2423: AB3G38_04320
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Entry
AB3G38_04320 CDS
T10715
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pedo Pedobacter sp. WC2423
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pedo02000
]
AB3G38_04320
Transporters [BR:
pedo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
AB3G38_04320
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
XDC12075
LinkDB
All DBs
Position
1124791..1126425
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AA seq
544 aa
AA seq
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MKHYIYKSLIVFAGLAVTFSCKKSLVENNPSGITAESVYTTPAGFETLVNAAYSYQRWWY
GKEEGHSISEMGTDLWMSGAGDINTDLTQYINLQGTNAAITTEWQQLYAAVNLCNAGINK
IAGAGLSSTARPIREAELKFLRAFYYWHIVETWGGVHFSLNETQGVITTANKTPVETFNK
QIIEDLLFAVANLPVTTADYGRVTKPAAQAFLSRMYLTQKKNTEARDMAVAVINGGYGFT
LLPAYADLWKMSNLKNKEVVYTVNYSTNLSLNDLLDPILNPLGHSRGSNSGHMLYAMKYD
DQPGMLRDLANGRPFDRYMPTRFLLDLYDDNDSRYEGSFQTVWYANGTTRPAGMKIGDTA
ILTTKKVFPSTGKIYKVFDRNAVYNANGTVKDQLHYVSLNKFADPVRTSINEAQSARDVF
VIRFAELYLIAAEAEFNLGNPGAAATYLNVIRTRAAKSGKVAAMQITPAQVSLDFILDER
AREFAGEQIRWFDLKRTGKLLERVKAFNPDAKGITDFNLIRPIPRTQIDAVTNKSEFTQN
PGYQ
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaaacattatatatataaaagcctgattgtctttgcagggctggctgtaactttctcc
tgcaaaaaatcacttgtagaaaataatccctcaggaattaccgctgaaagtgtttatacc
acgccggcaggatttgaaacgcttgttaacgcagcctattcctatcagcgctggtggtat
ggaaaagaagaaggtcatagtatttctgagatgggtacagatctttggatgagtggtgct
ggtgatatcaatactgatttaacccaatatattaaccttcagggcacaaatgctgctatt
actaccgaatggcagcaactgtatgcggcagttaatttgtgcaatgcaggaataaataag
atcgcaggagcagggctgtcgtccactgccaggccaataagagaggctgaattaaagttt
ttgcgtgcattttattactggcatatcgttgaaacctggggaggggttcatttttcattg
aatgaaactcagggagtaatcaccacggcgaataaaacacctgtagagacctttaataag
caaattattgaggacctgttatttgcagttgccaatctgccggttaccacagcagattat
gggagagtgaccaaacctgctgcccaggcctttttatcaagaatgtatctcacacaaaag
aaaaatacagaggccagggatatggctgttgcagtaattaatggtggttatggctttaca
ttattgcctgcctacgctgacctgtggaaaatgtcgaatctcaaaaataaggaagttgtt
tataccgttaattactcaacaaatctatcattgaatgatcttttggatccgatcctcaat
ccattaggccatagcagaggcagtaatagcggacacatgttgtatgcgatgaaatacgac
gaccagccaggtatgttgcgtgaccttgctaacggaagaccttttgaccgttatatgcct
acacgttttctattggatctatatgatgacaatgattccaggtatgagggttcatttcaa
acggtctggtatgcaaacggtacgaccagaccagcagggatgaaaataggagatactgct
attctgactactaaaaaagtatttccatccacgggtaaaatatataaagtatttgatcgc
aatgccgtttacaatgcaaacggaacagttaaggatcaattacattatgtttctctgaat
aaatttgcagatcctgtcagaacgagtatcaatgaggcacagagtgcaagagatgtcttt
gtgattcgttttgccgagttatatctgattgctgctgaagctgaatttaatctggggaat
ccgggagctgctgcaacctacttaaatgtgatccgtaccagagcggctaaatctggtaaa
gtggctgccatgcagattacgccagcgcaggttagcttggactttatattagatgaacgg
gcaagggagtttgccggtgagcaaatacgctggtttgatttgaaaagaactggtaaatta
ctggaaagggtcaaagcatttaaccctgatgcgaaaggtataactgactttaacctgatc
aggccaattcccagaacacagattgatgcggttactaataaaagtgaattcacacagaat
cctgggtatcaataa
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