Pedobacter sp. WC2423: AB3G38_04325
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Entry
AB3G38_04325 CDS
T10715
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo00040
Pentose and glucuronate interconversions
pedo01100
Metabolic pathways
pedo02024
Quorum sensing
Brite
Enzymes [BR:
pedo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AB3G38_04325
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NCBI-ProteinID:
XDC12076
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Position
complement(1126568..1127677)
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AA seq
369 aa
AA seq
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MKTRVNYLTSSAVALCIAFISFGCQKSKDPGAGTENLDATKLKTATEATCTVQGWASQNG
GTTGGGTATPTVVTNYTALKAAIQNVNVKVVQVNGTIIIPDAGRISFQDQTGKTIFGSAG
AKLVSNDQSKANSGIINVKRCTNIIIRNLIFEGPGAYDTDGWDNAILDASTNVWVDHCEF
RDGVDGNFDIKNISDYITVSNCKFGYLKPPRAGGSGGSDDHRFSGLIGSSDSATADRNRL
RVTFVRCWWAEGCVARMPRVRFGKVHLVNNYFSSTVSKSCIQAGFEANILAEANVFENVK
NPVDLMDNKSTAVQLKNNTFTNVTGNILGNGNTAFTPSYSISTLNSSSVKAAVTSSGGAG
ATLSGNNCS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgagagtaaactacctcacctcttcggctgtggccttgtgcattgcctttatt
tcctttggttgccagaaaagtaaagatccgggtgctggcacagaaaacttagatgcaaca
aagctgaaaacggcaactgaagctacttgtactgtgcaaggatgggcctcacaaaacgga
gggactacaggtggcgggacagctacgccaacagtagtcactaattatacagctttaaaa
gctgccatacaaaatgttaatgtgaaagtggtacaagttaatgggacgattataatacca
gatgccggaagaatctctttccaggaccagacaggaaaaaccatctttggttctgccgga
gcaaaactggtttccaatgatcaaagcaaagctaattctggtattattaatgttaaaaga
tgtacaaatattatcatcaggaacctgatcttcgaaggccctggcgcttatgatactgac
ggctgggataatgcaatattagacgcaagtacaaatgtatgggttgaccattgtgagttc
agagacggcgttgatggcaactttgatattaaaaatatctctgattatattacagtgtct
aattgcaagtttggttatttaaaaccgccaagagcaggtggttcgggtggttcagatgat
catcgtttttcgggcctgatcggttcaagcgatagtgctactgctgatagaaaccggctt
cgtgttacatttgtacgttgctggtgggctgaaggctgtgtagcaagaatgccccgtgta
aggtttggtaaagtgcacctggtcaataactactttagcagcacagtaagcaagagctgt
atacaggcaggttttgaagcaaatattctggcagaggcgaacgtttttgaaaacgttaag
aaccctgtagatttaatggacaataaatctacagctgttcagcttaaaaataacacgttt
actaatgtaacgggaaatattctgggcaatggtaatactgcatttacaccttcttacagc
atttcaacgctgaattcatccagtgttaaagctgcagttacttcatcgggtggcgcagga
gctacactgtctggtaataactgttcctga
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