Pedobacter sp. WC2423: AB3G38_05020
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Entry
AB3G38_05020 CDS
T10715
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
pedo Pedobacter sp. WC2423
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pedo02000
]
AB3G38_05020
Transporters [BR:
pedo02000
]
Other transporters
Pores ion channels [TC:
1
]
AB3G38_05020
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
XDC12212
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Position
1321044..1322912
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AA seq
622 aa
AA seq
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MKKMIPMLVTLCLSAGYAAAQNDTTKNLNEVMVRENRLKLPFSKQNRNIWIIDNQQIKNL
PSRSISELLSYVTGVDVRQRGPGGVQADISIDGGTFDQTLVLINGIKVSDPQTGHNMMNL
PVSVDDIDHIEVLRGSASRIYGTNALTGAINIVTKTVTRTGVSANVFTGSSFKKDEVSGD
TYANYGIRATGTLALKESSHLFSAGQEAGNGYRYNTAFNNQKFFYEGKVNVGKTDQLEIT
GGYIHNKFGANGYYSAPGDKEAEETVKTAIAAVAYKTQLTSFWSLMPRLSYRNNVDDYLY
IKQTPDKFHNHHVTQVLSAELNNSFQTGIGEFGLGIEARKEKINSTNLGKRNRDNAGIYG
EYKFDLVKNLLINAGSYVNYNSDYGWQAFPGIDAGYNFYGNWKVFVNVGTGQRLPTFTDL
YYKGPTNIGNDQLQPEKSRYAEGGIKYNSTHFVLNASLFKRRITNFIDWVKDKTTDPWQP
KNFSELNTMGYTLSADYNTGALENSAFNSLRFGLAYTYLNPKIKTTLPEANISRYAVESL
KNQLTATVNAEFLKVMALTVTARYCERINYKDYTVMDARLTYKLKRGSIYADASNLFDVN
FIQAGAVPMPGVWATLGYKIAL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaatgatacctatgctggttacattgtgcctgtctgcgggttatgcagcagcg
caaaatgataccacaaaaaatctaaacgaagtgatggtcagagagaaccgcctgaaactt
ccgttctctaaacaaaatcgtaatatctggataattgataatcagcagatcaagaatttg
ccatcaaggtcaattagtgaattactgagttatgtaacgggggttgatgtccgtcaacgc
ggacctggtggagtacaagccgacatcagtatcgatggcggaacctttgaccagactctt
gttttaatcaatgggattaaagtctcagatccgcagacgggtcacaatatgatgaattta
ccggtttctgtagatgatatcgaccatattgaagtattaagaggttctgcatcccgcata
tatggtacaaatgccttaacaggagcaattaacattgtcactaaaactgtaaccagaact
ggtgtttctgcaaatgtatttaccggaagcagttttaaaaaggatgaagttagtggagat
acttatgcaaattatggtatccgcgctaccgggacattagcattaaaagaatccagccac
ttattttctgctggacaggaagccggaaatggataccgttataatactgcttttaataat
cagaagttcttttacgaaggtaaagtcaatgtaggaaaaacagatcaactggaaattact
ggtggatatattcataataaatttggtgcaaatggttattattcagctccgggtgataaa
gaagccgaagaaacagtaaaaacagcaattgcagcagtggcttataaaacacagctgact
tctttctggagtttaatgccaagattgagttatagaaacaatgttgatgattatctatac
atcaaacaaacccctgataaattccacaatcatcatgttacccaagtattaagtgctgaa
ctgaacaatagttttcaaactggaatcggtgaatttggtctgggaattgaagcgagaaaa
gaaaaaatcaatagtacaaacctgggtaaaagaaacagggataatgcaggcatatatgga
gaatataagtttgacctggtaaagaatttgctgataaatgcaggaagttacgtgaattac
aattctgattatgggtggcaggcttttcctggcattgatgccggatataatttttatgga
aactggaaggtttttgtgaatgttggaacaggacaacgcctaccgacttttactgatctt
tactacaaagggccaactaatattggaaatgaccagttacagccagaaaaatcccgatat
gctgagggaggaattaaatacaattccacgcattttgtattaaatgcaagtttgtttaaa
cgcaggattaccaatttcattgactgggtgaaggataaaacgacagatccgtggcaacct
aagaatttcagtgaactgaatactatggggtatacgctaagtgcagattataatactgga
gcactggagaattctgctttcaatagcttaagatttggtctggcttatacttatcttaat
cctaagattaaaacaaccttacctgaagccaatatctcccgttatgctgtagaatctttg
aaaaatcaattgactgctactgtgaatgcagagtttttgaaagtaatggcattaacagta
accgcaaggtattgtgaacggattaattataaagattatacggtaatggatgcaaggctg
acttataaattaaagcgcggcagtatttatgccgatgcttcaaacctattcgatgttaac
ttcatccaggccggagcggttcctatgcctggtgtatgggcaacacttggttataaaatt
gctttatag
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