Pedobacter sp. WC2423: AB3G38_05570
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Entry
AB3G38_05570 CDS
T10715
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo00550
Peptidoglycan biosynthesis
pedo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AB3G38_05570 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pedo01003
]
AB3G38_05570 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pedo01011
]
AB3G38_05570 (pbpC)
Enzymes [BR:
pedo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
AB3G38_05570 (pbpC)
Glycosyltransferases [BR:
pedo01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
AB3G38_05570 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
pedo01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
AB3G38_05570 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
XDC12319
LinkDB
All DBs
Position
1448916..1451306
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AA seq
796 aa
AA seq
DB search
MSIKLKPVSKLLIGDGVVFLLLCWFLLCLPARLFVSPTSYVVEASNGELLSAAIAADGQW
RFPAADTIPDKFAKCIIAFEDKRFYKHPGIDILAMARAMKQNFRARGIVSGGSTLTMQTI
RLSRRQDRTVAQKLFEILLAIRLEVRSSKQEILKLYAANAPFGSNVVGLEAAAWRYFGRS
PQSLSWGEMATLAVLPNSPRLVHPGRNITRLITKRNNLLDALAKLKIIDLATANLSKLEP
VPGKPRPLPQDAPHLLNRFKTERARLNISATRIRSTLDESLQLKINSLLKRYNNRYRAND
IDNIAALVLNVKNGTVMAYAGNIYQPENAALESHVDMIKAPRSPGSTLKPLLYASMLNDG
LILPKTLIPDIPTQIGNYSPQNYDLGYDGAIAADRALSRSLNIPAVRLLQTYKYPRFYDQ
LKKLGFSTLNQPADHYGLSLILGGSEVTLWDLAKTYMGMARSLNHYNDYKGYYNPHDYDA
PVYVQQKNIEKPEENELQRNSFLDNGSIWNTFNAMEELMRPGDEGLWEQFSSAQRLAWKT
GTSFGFRDAWAIGLTPDYVVCVWVGNADGEGRPGLTGIDVAAPVLFDIFRQLPKGKWFET
PKNKLKQLTICRQSGYKASEYCPDRVNELVPFAGEKTIVCPYHKIIHLDHSSTFRVTDQC
VSPANMVHQPWFILPPAMEYYYKIKHSDYKPLPPFMEGCGNTGNNYVMDMIYPKNNAAIY
IPLEFDGKRGKVVFTATHKNAAAQIYWHIDNEYVATTAHTHQLSLSPAPGKHTLTLVDDQ
GERFVQQFTILDREKY
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgagcataaaattaaagccggtttcaaaactgctgattggcgatggtgtagtattcctg
ttattgtgctggtttttactctgcctgcctgccagactatttgtctctcccacttcttat
gtcgtggaagcttccaatggagaattattgagcgccgccattgccgcagatgggcaatgg
cgctttcctgctgctgacactatacctgacaaatttgcaaaatgtattatcgcatttgaa
gacaagcggttttacaaacatcccggaatagacattctggcgatggcaagggcgatgaaa
caaaacttccgtgccaggggaattgtaagtggcggcagtacactgaccatgcaaacgatc
cggcttagccgcagacaagaccgtacggttgctcaaaagttatttgaaatcttactggcg
atccgcctggaagttagaagctctaaacaagaaatcctcaaattatacgctgctaacgca
ccatttggcagtaatgtagttggcctggaagcagcagcctggcgctatttcggcagaagc
cctcaatcactttcctggggagaaatggctacattagctgttttacccaatagtcctaga
ctggtacatccgggccgcaatattacccggctgattaccaagagaaataatctgcttgat
gcgctcgctaaattaaaaatcatagatctggctacagctaatttgtccaagctggagccc
gtacccggtaaaccaaggccactaccacaagacgcgccccatttgctgaatagatttaaa
accgaaagagccagattgaatatctctgccacgcgcataaggtcaactttagatgaatct
ttgcaattaaagatcaattctttattaaaaagatataacaaccgctatcgggcaaatgat
attgataatattgctgcgctggtgctgaatgtaaaaaacgggacagtgatggcttatgcg
gggaatatttatcagccggaaaatgccgcattggaaagtcatgtagatatgatcaaggct
ccgcgcagtcccggcagtaccttaaaacccctgttatatgccagtatgttaaatgacggg
ttgatccttcctaaaactttaattcctgatattcctacccaaatcggtaactattctccg
caaaattatgatctaggttatgatggagcaattgctgccgatcgtgcattgagccgctca
ttgaacattcccgctgttcgtttattacagacttataaatatccccgcttttatgatcaa
ttaaaaaaactgggattttctacgcttaatcaacccgcagaccactatggtttatcctta
attcttggtggcagtgaagtcacgctatgggatcttgccaaaacttatatgggcatggcc
agatcactcaaccattataatgattataaaggatattataacccgcatgattatgatgcc
ccggtttatgtacagcaaaaaaacatagaaaaaccagaagagaacgaactccagcgtaac
tcatttcttgacaatggatctatctggaacacatttaacgcgatggaagaattgatgcgt
cctggtgacgaaggactctgggagcaattttcctctgcacaacgtttagcctggaaaacc
gggacaagttttgggttcagagatgcctgggcaattggccttactcctgattatgtagtt
tgtgtctgggtaggaaatgcagatggtgaaggcaggcccggattgactggaattgacgtt
gctgcaccagtattatttgatattttcaggcagctgcctaaaggtaaatggttcgaaaca
ccaaaaaacaaattaaaacaactgacaatttgtcgtcagagcggctataaagccagtgaa
tattgtcctgaccgggtgaatgagctcgttccttttgcaggagaaaaaacaatagtttgc
ccctaccacaagatcatacatcttgaccatagctccactttcagagtcacagatcaatgt
gtaagtccggcaaatatggtccaccagccctggttcattctgccaccggcaatggaatat
tattataagatcaagcatagcgactataaacctttgcctccatttatggaaggatgtggc
aataccggtaataattatgtgatggatatgatttatccaaagaataatgcggcaatttat
attccgttagagtttgatggtaaaagaggaaaagttgtttttaccgcaacacataaaaat
gctgctgctcagatttactggcatatagataatgaatatgtagcaacaactgcacacaca
catcagctgagcctgagcccggctccgggcaaacatacgctaacactggtggatgatcag
ggagaaagatttgttcagcagtttaccatactggatcgggaaaaatactaa
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