Pedobacter sp. WC2423: AB3G38_08375
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Entry
AB3G38_08375 CDS
T10715
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AB3G38_08375 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pedo03400
]
AB3G38_08375 (xseB)
Enzymes [BR:
pedo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
AB3G38_08375 (xseB)
DNA repair and recombination proteins [BR:
pedo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AB3G38_08375 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
PBSX_XtrA
CENP-Q
DUF4088
DUF7179
DUF16
Nuf2_DHR10-like
Motif
Other DBs
NCBI-ProteinID:
XDC12861
LinkDB
All DBs
Position
complement(2101278..2101484)
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AA seq
68 aa
AA seq
DB search
MEKNLNYEAAYSELTQIAQEIETEAVSVDVLAEKVKRASELIAFCQTKLRSTETEVNKII
KQMENQPL
NT seq
207 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaatttgaattatgaagcggcttatagtgaactgacacagattgcccaggaa
atagaaactgaagctgtttctgtagatgtacttgccgaaaaagtaaaacgggcttccgaa
ctgattgctttttgtcagacaaaattgaggtctactgagactgaagtcaacaaaattata
aagcagatggaaaaccaacccttatag
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