Pedobacter sp. WC2423: AB3G38_08825
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Entry
AB3G38_08825 CDS
T10715
Name
(GenBank) SNF2-related protein
Organism
pedo Pedobacter sp. WC2423
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Motif
Other DBs
NCBI-ProteinID:
XDC12949
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Position
2199166..2202552
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AA seq
1128 aa
AA seq
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MTDIPNLFETARTPSNTYIITDFKPALFNTVFILKHSSAQADTTAPNYFNLVPQHISIGY
ASFFNNSSAIKFPQVDVRLHQNNLILSCRCSAIKSRLCEHQMQVLFNLIERPELRIFFDQ
QLRHEKIRTFATAYGLENESPDDLFTLEYANKKFEIIPVIKDLLPITKENNNLLKELLLP
KPGLPFLKHSPVEEDTNKILVLKQHRYYSHFQADLLECALTATGKIKNPLKQLNAMDYIW
ATENPEELKFYTAVSKFQQNYETAQAEADVNGLKALVKNPLELAVFYHDPKISPNLTISS
IIPVNLKSLQLDIRLAVNLTNGFYTISGELILENKTYDLKFLNLKFSYFIFYNDTLYLID
NPDFLRVVDFFRQNNNHLVIHESKYPEFKEDILSRLENKIHINYSYLKPATHEQLVETHF
DQSTEKIIYLSDSENYVLITPVMKYGNVEVPVLSRKQIHAADHAGNIFTVTRDEQQELQF
ISSMTRQHPHFEEQLDKDCFYLHKKRFLDEGWFLAAFEEWHQQNITILGFNQLKGNHVNP
NKAKITIAVNSGLNWFDTAFEVAFGNQKVPLKHLHRSIRNKSKFVKLGDGTMGLLPQEWI
DRLTKYFNAGEVVDESIRTPKVNFTEITDLYEEEVLSTVVKLELSAYKAKIADFKNIKKV
EIPAALNATLRDYQKEGLNWLNFLDEFNFGGCLADDMGLGKTIQIIAFILSQRNKGHQNT
NLIVVPTTLIFNWQAEIAKFAPDLKIHTIYGADRIKDHEDFSNYEIILTSYGTLLYDINW
LKNYFFNYIFLDESQTIKNPDSLRYSAVRLLQSRNKIAITGTPIENNTFDLYGQLSFACP
GLLGSKQYFRDHYSSPIDKFKDTRAATNLKKKVSPFILRRTKKEVASELPDKTEMVIYCE
MGTTQKNAYDACKNEYKKFLLSEKDDHAEKHTLHILKGLTQLRQICNSTALLKDNLLHGA
TSSKITTLMEEIDSHSPQHKILVFSQFVTMLDLIKKELEHKEIPFEYLSGKTTNREKKVE
NFQQNDNIRVFLISLKAGGTGLNLTQADYVYLVDPWWNPAVENQAIDRCYRIGQKKNVVA
IRLICPDTIEEKIMKLQETKKELVNDIIQTDTSLLKSLSKADLIELFS
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacattcccaacctatttgaaactgccagaaccccctccaatacctatataatc
actgattttaagcccgctcttttcaatacagtttttatattaaaacacagttccgctcag
gctgatactacggcaccaaattatttcaatctcgtaccccagcacatttctataggttac
gcctcttttttcaataatagcagtgccattaaattcccgcaagttgatgtccggcttcat
caaaacaatttaattttatcctgccgttgctctgccattaaaagcagactatgcgaacac
cagatgcaggtactctttaacctgatagaacgtccagagctccgcattttttttgaccag
cagctcagacatgaaaaaataagaacattcgcgactgcttatggtctggagaatgaaagt
cctgacgatttgttcaccctggaatacgccaataagaaatttgagatcattcctgtgatc
aaagacctgcttcccatcacaaaagagaataataacctccttaaggagctgctcttacca
aaaccagggcttccatttttaaaacatagccctgtagaagaagacaccaataagatcctg
gttttaaaacagcaccgttattactctcattttcaggcagacttgctggaatgcgcacta
acagctactggtaaaataaaaaacccattgaagcaattgaatgcaatggattacatatgg
gcgacagaaaatccagaagaactaaaattctatacagcagtctccaaattccagcagaac
tatgaaactgctcaggcagaggcagatgtcaatggactaaaagccctcgtcaaaaaccct
cttgaattagctgtcttttaccatgacccgaagatttctccaaacctgactattagttct
atcatcccagtcaacctaaaaagccttcaactcgacatccgtcttgctgtaaacctaaca
aatggcttctacacgatttcaggtgagcttattttagaaaacaaaacatacgaccttaag
ttcctcaacctaaaattcagctattttatattttacaacgacaccctatacctcatcgat
aacccggatttcctgagagttgtggatttcttcaggcaaaataacaaccatctggtgatc
catgaatcaaaatatccggaatttaaagaagacatcctttccagactagagaacaaaatt
catatcaattactcttacctgaaacccgctacccacgaacaattagtagaaacccacttt
gatcagtccacagaaaaaataatttatctctcagactctgaaaactacgttttaattacc
cccgtaatgaaatatgggaatgttgaggttcccgtcctgtccagaaagcaaatccatgcc
gcagatcatgccggtaatatatttaccgtaacccgggatgaacagcaggagctgcagttt
atctcttccatgacccgtcagcatccccactttgaagagcagctggacaaagactgcttt
tacctgcataaaaaacgtttcctcgacgaaggatggttcctggctgcctttgaagaatgg
catcagcaaaacatcaccatactaggctttaaccaacttaagggcaatcacgtcaaccct
aacaaggccaaaataaccatcgccgtaaacagtggcctcaactggtttgacactgcattc
gaagtcgcattcggcaatcagaaagtaccgctcaaacacctgcacagatcaatcagaaat
aaaagcaaatttgtcaaactcggtgacggcactatgggtctgctcccccaggaatggatc
gatcgcctgactaaatatttcaatgccggagaggtcgtagacgaatccatccgtacccca
aaagtaaacttcactgaaatcacagacctttacgaagaagaggtgttgtccacagtagta
aaactggaactaagcgcctataaagcaaagattgcagactttaaaaacatcaaaaaagta
gaaattccagctgccctgaacgcaacccttcgtgactaccagaaagaaggcctgaactgg
ctgaacttcctcgatgaatttaatttcggcggctgtctggcagatgatatgggtttgggt
aaaaccatccagatcattgcatttatactttcccagcgcaataaaggtcaccaaaatacc
aacctcattgttgtacccactaccctgatctttaactggcaggcagaaatagcgaaattt
gcccccgaccttaaaatacacaccatttacggtgcagaccggataaaagatcacgaagac
ttcagcaattacgaaattattctgacctcttatggcaccctgctctacgatatcaactgg
ctaaaaaactacttctttaattatattttcctggatgagtcccagactataaaaaatcca
gactccctgcgttacagcgcagttcgtttgctgcaatccagaaataagattgctataact
ggtaccccgatcgaaaataacacctttgacctttacggacaactctcctttgcctgtccc
ggattactcggcagtaaacaatacttcagggaccattactcttccccgatagataaattc
aaagacacccgggccgccaccaacctaaaaaagaaggtgagtccctttatcctgcgcaga
acaaaaaaagaagtggcctcagaactcccggacaaaaccgagatggtgatttactgtgag
atgggcaccactcaaaaaaacgcctacgacgcctgcaaaaacgagtacaagaaattcctg
ctatccgaaaaagacgaccacgcagaaaagcacaccctacacatcctcaaaggcctaacc
cagctcagacagatctgtaactctactgccctgctcaaagacaaccttcttcacggtgcc
acctcttctaaaatcacgacactgatggaagaaatagacagtcactccccccagcataaa
atcctggtattctcacaattcgtgacgatgcttgacctgatcaaaaaagaactcgagcac
aaggagatcccatttgaatacctcagtggaaaaaccacaaacagagaaaagaaagtagaa
aacttccagcagaacgacaacatacgcgtcttcctgattagtctgaaagcaggcggaacc
ggccttaaccttacccaggcagactacgtatacctcgtagacccctggtggaaccctgcc
gtagaaaaccaggctatcgaccgttgttaccggatcggccagaagaaaaacgtagtggcg
atcagattaatctgtccagacactatcgaagaaaagatcatgaaacttcaggaaacaaaa
aaggagctcgttaacgacatcatacaaaccgatacttccctactaaagtcactctcaaaa
gctgaccttatcgaactattcagttaa
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