Pedobacter sp. WC2423: AB3G38_09455
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Entry
AB3G38_09455 CDS
T10715
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo03030
DNA replication
pedo03430
Mismatch repair
pedo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB3G38_09455
03430 Mismatch repair
AB3G38_09455
03440 Homologous recombination
AB3G38_09455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pedo03032
]
AB3G38_09455
03400 DNA repair and recombination proteins [BR:
pedo03400
]
AB3G38_09455
Enzymes [BR:
pedo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB3G38_09455
DNA replication proteins [BR:
pedo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB3G38_09455
DNA repair and recombination proteins [BR:
pedo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB3G38_09455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
DEDDh_C
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
XDC13073
LinkDB
All DBs
Position
2339380..2340771
Genome browser
AA seq
463 aa
AA seq
DB search
MLKYAVVDIETTGGFAAGNGITEISILIHDGSKVTDRFETLINPQQDIPIYIQTLTGISE
EMVSSAPLFEQVAPQIYELLKDKIFVAHNVNFDFSFVRHQLAQSGFVLQSKKLCTVRMSR
KIIPGLSSYSLGKLCACLGIPLNDRHRAGGDAAATALLLKLLLDKDTEGAIPLSLIKSSK
EQVLPPNLSRDSIDALPDQPGVYYFKDQKGKIIYVGKAINIKKRVCSHFSGNKINRQRQD
FLKEIHEVDFTICGTELMALILEASEIQKHWPEKNRALKRFEQKYALYDFEDQKGYIRLG
IDKYKKNSHALYTFNSLLSGQSMLRGMINEHKLCEKLCFIQKNRLACTAHEKGNCNGACL
GIEDPAAYNARVDEAITHLKVALPSFALIDSGRNKEEKSCLWVEEGKFYGMGYISFHSDI
TDLENLKSCIVPYTSNDYILNLILAHAESHPQQRIEISKSIQF
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaatacgcagtagtcgatattgaaactaccggtggttttgccgccggtaatggg
atcacggaaatttctattctgattcatgatggttcaaaagttacagatcgctttgaaaca
ttgattaatcctcagcaggatataccgatctatatacaaaccttaactggtatcagtgag
gagatggttagcagtgctcccctgtttgaacaagtagctcctcaaatttatgaactttta
aaggataagatttttgtagcacacaatgtaaacttcgatttttcatttgtaaggcaccag
cttgcacagtcgggatttgtgttgcaatctaaaaaactgtgtacggtaagaatgagcaga
aaaatcattcccggactttcttcttatagtttgggtaagctctgcgcttgtcttggtatc
ccactaaatgaccgtcaccgtgctggtggtgatgctgcagccactgctttattgctaaag
cttctattggacaaagataccgagggagctattccgctttctttaatcaaaagttccaaa
gaacaagtattgccgcctaatttatcaagagatagtattgatgctttacctgatcagccc
ggagtgtactatttcaaagatcaaaaaggaaagattatctatgtgggcaaagctataaat
ataaagaagagagtatgttctcatttctccggaaataagattaacaggcaaagacaggat
ttccttaaggaaattcatgaggtggatttcacgatttgcggcacggagttaatggcgctg
attctggaagcttcagaaatacagaaacactggccagaaaaaaacagggctttaaagcgt
tttgaacagaaatatgctttatacgatttcgaagaccagaaggggtatatccgtttaggt
attgataaatataagaaaaacagccatgctttatatacttttaacagcttgctgtctgga
caaagtatgttacggggaatgatcaacgagcataagctatgtgaaaagttatgttttatt
cagaagaacagactggcctgtactgcgcatgaaaaagggaattgtaatggcgcttgcctg
ggaatagaagatccggcagcgtataatgccagagttgatgaggctattactcatttaaaa
gtagcacttccctcctttgctttaatagattcgggtagaaataaggaagaaaagagctgt
ttatgggtcgaagagggtaaattttacgggatgggctacatttcttttcatagtgacatc
actgatctggaaaatctaaaatcttgtatagttccttatacttcaaatgattatatatta
aatttgattcttgctcatgcagaatcgcatcctcagcaaaggattgagatctcaaaatct
atacaattctag
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