Pedobacter sp. WC2423: AB3G38_10020
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Entry
AB3G38_10020 CDS
T10715
Name
(GenBank) TonB-dependent receptor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
pedo Pedobacter sp. WC2423
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pedo02000
]
AB3G38_10020
Transporters [BR:
pedo02000
]
Other transporters
Pores ion channels [TC:
1
]
AB3G38_10020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
XDC13183
LinkDB
All DBs
Position
complement(2494782..2496965)
Genome browser
AA seq
727 aa
AA seq
DB search
MMKKLTVLIAVLFFTGAAYGQSIFKAIIKDAKTNQVIPGVTVKIVGTGIRLLSGNDGFIF
LTPIPPGKQLVQFSSVGFKTRTDTLSFPLAQIAPMQIALESAEKDEELDEVVVSATRSGR
TIENIPTRIEVIAGEELDEKGNMKPGDIRMLLAESTGIQAQQTSATSGNASIRIQGLDGK
YTQIIRDGFPLYAGFSGGLGLLQIAPLDLQRVEVIKGSSSTLYGGGAIAGLVNLVSKKPA
DERQLNFLLNGTSALGLDASGFYAQKFKKAGATIYAAYNHGSAYDPANTGLTAIPEFNRF
TLNPKLFVYLNPGTTITAGLNTTVEKRIGGDLEYIKGNGNAQHSYFEENKTQRYSTQLEL
DHQLNDREKLVFRNSVGYYNRSIGLPDYLFSGVQLSTYSEVNYSRKGKKADWVGGINFLS
DHFKEDKNTSAALRSYQYTTIGGFVQNTWNLTDKFIVESGIRSDYHNEYGFFFLPRISGL
WKINEHISTRLGGGLGYKAPTVFTEDAERIQFRNVLPIDVNHTKAERSYGANYDINYRTI
LFDDQIGFSINQLFFYTKINNPILLTPTAGGDLTYIQPSGNLDTKGMETNVKISYSDFKL
FVGYTLADVNQQTGDHATVYPLVSKHRLNHVLMYEVEEKWKIGAEAYYFSKQRLNDGTTG
KSYWTAGLMAEKLWERFSIFINFENLTDTRQTKFDTIYTGSVTDPVFKDIYAPVDGLVIN
GGIKFIL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaaattaactgtgcttatagctgtactgttttttacgggagcagcttatggt
caatctatatttaaagcaatcattaaggacgcgaaaactaatcaggtcattcccggggtt
acggtgaaaattgtaggtacaggcattcgtcttttgtctggaaatgatggatttatcttt
ttaactcctattccgcctggtaaacagttagtccagtttagttctgtcggttttaaaacc
agaactgacactttatcatttccattagcacagattgcacccatgcagattgcattggag
tctgcggagaaagacgaagaattagatgaagtcgtggtttctgcgaccagaagtgggaga
actatcgaaaatattcctacacggatagaagttattgcaggagaggaactagatgaaaag
ggaaatatgaaacctggtgatattcgtatgctgcttgccgagagcacaggaattcaggca
cagcaaacttctgctacaagtgggaatgcaagtatccgtattcagggacttgatggaaaa
tatactcaaattatcagggacggttttccgctatatgcgggattttctggcggattagga
ttgttgcagattgcaccgctggatttacagcgtgttgaagttattaaaggttcatcttct
actttatatggtggtggagccattgcagggcttgtgaatctagtctctaaaaagccagct
gatgaacgtcagcttaactttcttttaaatggtacttctgctctgggactcgatgccagt
ggcttttatgcgcagaagtttaaaaaagcaggtgccactatttatgccgcttataatcat
gggagtgcttatgatcctgcgaatactggcttaacagcaataccggaatttaaccgcttt
acgttgaatcctaaactctttgtctatttaaatccgggtaccacaattactgccgggctg
aatactactgtcgaaaaacgtattggtggtgacctcgaatatatcaaaggcaatggtaat
gctcagcacagctattttgaagaaaataagacacagcgttacagcactcagcttgaattg
gatcatcaattaaatgatcgtgaaaaattggtattccgtaattctgtgggttattataac
aggagtattggtttaccggattatcttttttccggtgtacagctttctacttatagtgaa
gtgaattattcccgtaaaggaaaaaaagcagattgggtaggggggattaatttcctctca
gatcactttaaagaggataaaaacaccagtgctgcactgagaagttaccagtatactacc
atcggaggctttgttcagaatacctggaatctgacagataaatttatagtggaatctggt
atccggagtgattaccacaatgaatatggtttcttctttttaccaaggatctctggttta
tggaagatcaatgaacacatatcaacccgtttaggtggtggattaggttataaagctcct
actgtattcacagaagatgctgaacgtattcaatttagaaatgtattgccaattgatgta
aatcatacgaaagccgaacgttcttacggggccaattatgatatcaattaccggacaata
ttatttgatgaccagatagggttcagtatcaatcagctatttttttatacgaagattaat
aaccctattttgcttacgcctactgcaggtggtgatttaacttatatacagccaagcgga
aatctggatacaaaagggatggaaaccaatgtgaaaatttcttatagtgactttaaacta
tttgtagggtacacactggctgatgttaaccagcaaactggtgatcatgcaacagtctat
ccgctggtttccaaacatcgtttaaaccatgtcctgatgtacgaggtggaagaaaagtgg
aaaattggagcagaagcttattattttagtaaacaaaggctaaatgatgggacaacaggt
aaaagctactggacagccggattgatggctgaaaaactctgggaaagattttccatcttc
attaattttgaaaacctgacagatacacgtcagactaagtttgatacgatttatacaggt
tctgtaactgatccggtttttaaagatatttatgctcctgttgacggattagtcattaat
gggggaataaaatttattctataa
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