Pedobacter sp. WC2423: AB3G38_10505
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Entry
AB3G38_10505 CDS
T10715
Name
(GenBank) cystathionine gamma-synthase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo00260
Glycine, serine and threonine metabolism
pedo00270
Cysteine and methionine metabolism
pedo00450
Selenocompound metabolism
pedo00670
One carbon pool by folate
pedo01100
Metabolic pathways
pedo01110
Biosynthesis of secondary metabolites
pedo01230
Biosynthesis of amino acids
Module
pedo_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AB3G38_10505
00270 Cysteine and methionine metabolism
AB3G38_10505
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
AB3G38_10505
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AB3G38_10505
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pedo04147
]
AB3G38_10505
Enzymes [BR:
pedo01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
AB3G38_10505
Exosome [BR:
pedo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
AB3G38_10505
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
Met_gamma_lyase
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
XDC13275
LinkDB
All DBs
Position
complement(2619177..2620316)
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AA seq
379 aa
AA seq
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MKFATKAIHAGQEPDPTTGAVMTPIYQTSTYWQKSPGEHQGFEYSRGTNPTRQALENCLA
ALENAKYGMAFSSGMGATDTVLRLLQPGDEVITGNDLYGGSYRIFTKVYAKYGIKFHFLD
LSKPENMLPYINDKTKLVWIETPTNPTMQIIDIEGVAKITKEKGLILTVDNTFASPYLQN
PIDLGADIVMHSVTKYIGGHSDVVMGALLLNDEQLYKDLWFIYNACGATPGPQDAFLVLR
GIKTLHLRMKAHCENGEKVARFLKTHPKIDKIYWPGFEDHPNHDIAKKQMRGFGGMVSIT
LKGADLAETFRVASSFKVFTLAESLGGVESLINHPTTMTHGSIPKEEREKVGVTDNLLRL
SVGVEDIDDLLADLAQALS
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgcaactaaagccatacatgcaggtcaggaacctgatccaacaacaggagca
gtgatgactccaatctatcaaacctctacctactggcaaaaatcgccgggtgagcaccag
ggctttgaatattcgagaggaacaaatccgacccgtcaggcattggaaaattgtcttgct
gcacttgaaaatgcaaaatatggtatggctttctcttcggggatgggtgctacagatact
gttttgcgtttgttgcaaccaggtgatgaggtaattacaggtaacgatctttacggaggc
tcgtaccgtatctttacaaaagtatatgcaaaatatggcattaaatttcatttcctggat
ctgtcaaaaccagagaatatgctgccatatatcaatgataaaaccaagctggtttggatt
gaaacacctaccaacccaaccatgcagattattgacattgaaggcgtagctaaaattact
aaagaaaaaggattgatcctgactgtagacaacacttttgcttctccatatttacagaac
ccgattgatctgggagctgatattgtgatgcactctgtgactaaatacattggcggtcac
tctgatgtagtgatgggtgctttattattgaatgatgaacaattgtacaaagacctttgg
tttatctataacgcttgtggggcaactccaggtccgcaagacgctttccttgtattaaga
ggtattaaaactttgcacctgcgtatgaaagcacattgcgaaaatggcgagaaagttgcg
cgtttccttaaaacccatcctaagattgataagatctactggccgggttttgaagatcat
cctaaccatgacattgcgaaaaagcagatgcgtggttttggtggaatggtttctatcacc
cttaaaggtgccgatctggcagaaacattcagagtagcttcatctttcaaagtattcact
ttagcagaatcattaggtggagttgaatcactgatcaatcacccaactaccatgactcac
ggttcaatccctaaagaggaacgtgaaaaagtaggtgtaacagataacctgttgcgtctg
agtgttggagtagaagatatcgatgatcttttagctgatttagctcaggccctgagttaa
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