Pedobacter sp. WC2423: AB3G38_10565
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Entry
AB3G38_10565 CDS
T10715
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo03430
Mismatch repair
Brite
DNA repair and recombination proteins [BR:
pedo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
AB3G38_10565
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Gene cluster
GFIT
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NCBI-ProteinID:
XDC13287
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Position
complement(2632993..2635365)
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AA seq
790 aa
AA seq
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MIYPDNCLDRLGFSEVRQLILKHCLSPMGQYMVSKMQVMNKFDQINKFLRQTKEFKNILE
NQEPLQISTFFDIKSLAEKVRVEGSYLMEEELFQIYLSLQTVFSVLRFFEERKDIYPNLE
ALFEHLPVEKNILRKIEAVLDPKGKIKPNASAKLQEIIGDIAKGEQEVRKRMDVIYKQAV
ASNWVADGSLTIRDGRMCIPILAENKRKLKGFIHDESASGQTVYMEPEVVFTLNNKIRDL
EFDKRREIIRILIALTDDLRPFTPLLLSYHGFLTKLDFVRAKALFAIEVEADMPVLVAEP
RIKLINARHPLLYLSFKEDKKTVVPLNIHMNENLRIVLVSGPNAGGKSVCMKTVGLLQLM
LQSGLLIPVHESSEVGIFDNIFADIGDDQSIESDLSTYSAHLTKMRYFVAHATPKSLVMI
DEFGTGTDPQFGGPMAEAVLEVLNNKKVRGVMTTHYSNLKLFAGNTPGLENASMLFDNDK
MKPLYVLEIGKPGSSYAFEIAQNIGLQKEVLTLAREKTGTNQNRIDSLLVDLEREKKQIY
DTKIQLSLQQNKVKNLVKENEELQQFLEENRKTLIKEAKLEAQTIIKNANKLVENTIAGI
KENQADKEATKQLRQDLQKSLVQHQVKEEKKPEKVVISTTAIEVGDWVQLINTETMGQVM
EINRGNLVLALGDLRSVVKKDRVQKISNKQAKKVVQSNSFSGRMSEAIGNFTAELDLRGM
RGENAIQEVEKYLDKSIMLGFPFIKLIHGKGDGILRKLIREYLRKYSQVNRVEDEHADRG
GDGITYVYFN
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatatatcccgataattgtttagatagacttggcttcagtgaagtcagacagctcatc
ctaaagcattgcctgagtccgatgggacaatatatggtcagcaaaatgcaggtgatgaat
aaatttgatcagattaataagtttttaagacagactaaagagtttaaaaatatcctggaa
aaccaggagccgttacagatcagtactttttttgatattaaatcactggccgaaaaggta
cgtgtagaaggtagttacctgatggaggaagaattgttccagatctatctctctttacag
accgttttttcagtactacgcttctttgaggaaagaaaagatatttatccaaatctggaa
gctttatttgagcatttaccagtggaaaagaacatcctccggaaaatagaagcagtactt
gaccctaaaggcaaaatcaaaccgaatgcttctgctaaattacaggaaatcattggggat
atcgctaaaggagaacaggaagtccgtaaacggatggatgtgatttacaagcaggcagta
gccagcaattgggtagcagatggaagtttaacaatccgtgatggaaggatgtgtattcct
attctggccgagaataagcggaaactgaagggctttattcatgatgagtctgcgagtggg
caaactgtttatatggagcctgaagttgtgttcacactgaataataagataagagatctt
gaatttgataagagaagggagatcatccgtattttaattgcgcttactgatgatttaaga
ccatttacgcctttattactttcttatcatggattcctgactaaactggattttgtaagg
gctaaagctttatttgcgattgaggtagaagcagatatgcctgtgctggtagctgagcca
aggattaaactgatcaatgcaaggcatcctttgttatacttatcatttaaagaagataag
aaaacggtagtgcctcttaacattcatatgaacgaaaatttaaggatcgtactggtttca
ggaccaaatgcgggaggtaaatcagtttgtatgaaaacagtggggcttctgcaactgatg
ttgcaatcaggtctgctgattcctgtgcatgagtcaagtgaggtcgggatatttgataat
atctttgctgatattggtgatgatcaaagtatagaaagtgatttgagtacttacagtgcg
catttaacaaaaatgcgttattttgttgcgcatgctacgccaaaatcattggtaatgatt
gatgagtttggtaccggaacagatcctcaatttggcgggccaatggctgaagctgtactg
gaagtactgaataataaaaaagtaagaggggtcatgaccactcactattcaaatcttaaa
ttatttgctggtaatactccgggactggaaaatgcttctatgttgttcgataatgataag
atgaagcctttatatgtactggaaataggtaaaccaggaagttcttatgcttttgaaatt
gcacagaatattggcctgcaaaaagaggtgctgacgctggcaagggaaaaaacaggaaca
aatcaaaatagaattgatagcttactggtcgatctggaaagagagaaaaagcagatttat
gatactaaaatccagttatctcttcagcagaataaagtaaagaacctggttaaagaaaac
gaggaacttcagcagtttctggaagaaaacaggaaaacactgattaaggaagctaaactt
gaagcgcagacgattattaaaaatgccaataaactggtagaaaatacaattgctggtatc
aaagagaatcaggctgataaagaagcgaccaaacaactaagacaggatttacaaaagagc
ctggttcagcaccaggttaaagaagagaagaagcctgagaaggtggtgatctccacgact
gctattgaagttggggattgggtacagctgattaatacggaaaccatgggacaggtaatg
gaaattaaccgtggtaatttagtgctggcactaggtgatcttcgttctgtggtgaaaaaa
gacagggtacagaaaatcagcaataaacaggctaaaaaagttgtacagagcaattctttt
tcagggagaatgtctgaagcgattgggaattttactgctgagctggatcttcgtggaatg
cgtggtgaaaatgcaattcaggaagttgaaaagtatctggataagtcgattatgctgggc
tttccttttatcaagctgatccatggaaagggggatggtatcctccggaaattaatcaga
gagtatctgcgcaagtacagccaggtgaacagggttgaggatgagcatgcggatagaggc
ggcgatggtataacctatgtgtatttcaattaa
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