Pedobacter sp. WC2423: AB3G38_13505
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Entry
AB3G38_13505 CDS
T10715
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pedo Pedobacter sp. WC2423
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pedo03016
]
AB3G38_13505 (truB)
Enzymes [BR:
pedo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AB3G38_13505 (truB)
Transfer RNA biogenesis [BR:
pedo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AB3G38_13505 (truB)
Prokaryotic type
AB3G38_13505 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
XDC08974
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All DBs
Position
3282551..3283294
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AA seq
247 aa
AA seq
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MSAQKLLERTFNFAEGELLLINKPYKWTSFDVVGKIRNSLKPLKLKVGHAGTLDPLATGL
LILCTGKLTKQIDTFQAEDKEYTGTMILGATTPSFDMETVVDQEYPLTNLTEEAIYAATA
PFTGDIQQYPPAHSAVKVNGERLYVKARRGEEQELRLRFVSVPVFEITRIALPEVDFRII
CSKGTYIRSLVSDFGKHLENGAYLSKLTRTRSGNFSLEDAFEVTDLVEYLKNKREAAAAG
QADTNTQ
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgcacaaaagttactggaaagaaccttcaattttgccgaaggagagttattactc
atcaataaaccctataagtggacgagttttgatgtagtagggaaaataagaaattcgtta
aaacccctgaaattaaaagttggccatgcagggacattagacccgctggctacaggctta
ttgattttatgtacaggcaaactgactaaacagatcgatacctttcaggcagaagacaaa
gaatataccggaacgatgatcctgggggctacaacgccctcttttgatatggagacggta
gtggaccaggaatatccactcactaatttaactgaagaagcaatttatgccgctactgca
ccatttaccggtgacatacagcaatatccaccagcccattccgcagtcaaagtaaacgga
gaacgtttatatgtcaaagcccgcagaggcgaagaacaggaattgaggcttcgttttgta
tccgtacccgtctttgagattacccgtattgctttaccagaggttgacttcagaattatt
tgcagtaaaggtacttacatcagatcactggtttcagatttcggaaaacatcttgaaaat
ggtgcttatttatcgaaacttacccgcaccagaagtggtaatttctctttagaagacgcc
tttgaagtaaccgatctggtagaataccttaaaaacaaaagagaagcagccgcagccgga
caagctgatacaaatacccaatag
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