KEGG   Pedobacter sp. WC2423: AB3G38_14295
Entry
AB3G38_14295      CDS       T10715                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pedo  Pedobacter sp. WC2423
Pathway
pedo00010  Glycolysis / Gluconeogenesis
pedo00020  Citrate cycle (TCA cycle)
pedo00260  Glycine, serine and threonine metabolism
pedo00280  Valine, leucine and isoleucine degradation
pedo00310  Lysine degradation
pedo00380  Tryptophan metabolism
pedo00620  Pyruvate metabolism
pedo00630  Glyoxylate and dicarboxylate metabolism
pedo00640  Propanoate metabolism
pedo00670  One carbon pool by folate
pedo00785  Lipoic acid metabolism
pedo01100  Metabolic pathways
pedo01110  Biosynthesis of secondary metabolites
pedo01120  Microbial metabolism in diverse environments
pedo01200  Carbon metabolism
pedo01210  2-Oxocarboxylic acid metabolism
pedo01240  Biosynthesis of cofactors
Module
pedo_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pedo_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pedo_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pedo_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pedo00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    AB3G38_14295 (lpdA)
   00020 Citrate cycle (TCA cycle)
    AB3G38_14295 (lpdA)
   00620 Pyruvate metabolism
    AB3G38_14295 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    AB3G38_14295 (lpdA)
   00640 Propanoate metabolism
    AB3G38_14295 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    AB3G38_14295 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    AB3G38_14295 (lpdA)
   00310 Lysine degradation
    AB3G38_14295 (lpdA)
   00380 Tryptophan metabolism
    AB3G38_14295 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    AB3G38_14295 (lpdA)
   00670 One carbon pool by folate
    AB3G38_14295 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pedo04147]
    AB3G38_14295 (lpdA)
Enzymes [BR:pedo01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     AB3G38_14295 (lpdA)
Exosome [BR:pedo04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   AB3G38_14295 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_binding_3 FAD_oxidored NAD_binding_8 HI0933_like Thi4 GIDA Lys_Orn_oxgnase DAO AlaDh_PNT_C 3HCDH_N zf-C2H2_3rep DHQ_synthase UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: XDC09122
LinkDB
Position
complement(3473867..3475273)
AA seq 468 aa
MQYDVVIIGSGPGGYVSAIRCAQLGLKTAVIEKYKTFGGTCLNVGCIPSKALLDSSEHYH
NAAHTFTTHGIDLKDLTVNMPQMIARKDDVVAQNTAGITYLFKKNKIDSFEGLGSFVDKN
TIRITKTDGTSETITAKNVVIASGSKPTALPFLPIDKKRIITSTEALNIKEVPKTMVVIG
GGVIGLELGSVYARLGTKVSVVEYLPSIIATMDAGLGKELQRVLKKSLGMEFFMGHKVTG
ATAKGEKVTVSALNAKGEEMNLEADYCIVAVGRTAYTEGLGLENIGIKTEERGNKIPVNA
HLETAVQGVYAIGDVITGAMLAHKAEDEGIFVAETIAGQKPHINYNLIPGVVYTWPEVAS
VGYTEEQLKEKGVKYKAGSFPFKASGRAKASMDTDGFVKVLADEATDEILGVHMIGPRAA
DMIAEAVVAMEFRASAEDIARICHAHPTYTEAIKEAAMAATANRAIHI
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgcaatacgacgtcgttattattggttctggtcctggtggttatgttagcgcaataaga
tgtgcacaattagggttaaaaacagcagttatagaaaaatataaaacttttggtggaact
tgcctgaatgtaggttgtattccatctaaagccttgttagactcttcagagcattatcat
aatgctgcacatactttcactactcatggaattgacctgaaagatctgactgtgaatatg
ccacagatgattgcacgtaaagatgatgtggttgctcaaaatacggctggtatcacttac
ttgttcaaaaagaataaaattgacagttttgaaggtttaggatctttcgtagataaaaat
acaatcaggattaccaaaactgacggaacatcagaaacaattacggctaaaaatgtagtg
attgcatcgggttctaaacctactgctttaccatttttacccatagataaaaaaagaatc
atcacttcgacagaagcattaaatataaaagaagttccaaaaacgatggtcgtgattggt
ggtggtgtaatcggactggaattagggtctgtttatgcacgtttgggaactaaagtttct
gtagtggaatacctgccttctatcatcgctactatggatgctggtttaggcaaagaatta
cagcgtgtattgaaaaaatcactgggtatggaattctttatgggccataaagtaacaggt
gcaactgcgaaaggtgaaaaagtaacggtttctgcattgaacgctaaaggcgaagaaatg
aatttagaagctgattactgtatcgtagctgttggccgtacagcttatacggaaggctta
ggtttagaaaatattggtattaaaactgaagaacgcggtaataaaattcctgttaatgca
catttagaaactgctgtacaaggtgtatatgccattggtgatgtaattacaggtgcaatg
cttgcgcataaagcagaagatgaaggtatttttgtagcagaaactatcgcaggtcaaaaa
ccacacattaactataacctgattccaggtgttgtttatacctggccggaggttgcatca
gtaggttatactgaagagcaattgaaagaaaaaggtgtaaaatataaagctgggtctttt
ccattcaaagcaagcggacgtgctaaagcaagtatggatactgatggttttgtaaaggtc
ctggctgatgaagctactgacgaaatattaggtgttcatatgatcggcccacgtgctgct
gatatgattgctgaagctgttgtagctatggaattccgcgcttctgctgaagatatcgca
agaatttgtcacgcacaccctacttatactgaagctattaaagaagcagctatggctgca
actgcaaacagagcgattcatatttaa

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