Pedobacter sp. WC2423: AB3G38_14405
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Entry
AB3G38_14405 CDS
T10715
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo00061
Fatty acid biosynthesis
pedo00071
Fatty acid degradation
pedo01100
Metabolic pathways
pedo01212
Fatty acid metabolism
pedo02024
Quorum sensing
pedo04146
Peroxisome
Module
pedo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AB3G38_14405
00071 Fatty acid degradation
AB3G38_14405
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AB3G38_14405
09145 Cellular community - prokaryotes
02024 Quorum sensing
AB3G38_14405
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pedo01004
]
AB3G38_14405
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pedo04147
]
AB3G38_14405
Enzymes [BR:
pedo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AB3G38_14405
Lipid biosynthesis proteins [BR:
pedo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AB3G38_14405
Exosome [BR:
pedo04147
]
Exosomal proteins
Exosomal proteins of breast milk
AB3G38_14405
Exosomal proteins of breast cancer cells
AB3G38_14405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
XDC09143
LinkDB
All DBs
Position
complement(3503630..3505408)
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AA seq
592 aa
AA seq
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MPVTVTRVFDLLKYNLEKFPKDEFISGKSNGVWKKYSTQQFSDTADNLSKGLLQLGMVKG
DRIAVMSHNRPEWNIADFAVNQFGGYHVPLYPTLAEHDIKFILENAGVSVVFVEDETLFK
KVKPIGEAVNPDLRIYTFNEVAGANHWSTLVEAGAKSQEFDLETYRAAVTPDDVLTLIYT
SGTTGTPKGVMLTHHNLVQNFINSAVVVPRGLENALSFLPLSHIFERMIIYLYLYMGVSV
YYAESMDTIVADIQSVKPNAFSTVPRLLEKVYDKIMEKGKALTGVKRGIFFWSVALAEQY
DMKSGWFYNFKLGIARKLVFKKWQEALGGNIVVIVSGGAALNPRLARIFWAAGMPVFEGY
GLTETSPVITVNHLENAMFGTVGPVIDGVEVKIAADGEVLTRGHNVMKGYYKREDLTAEA
IDKDGWFHTEDIGELVNGKFLKITDRKKEIFKTAGGKYVAPQMLENKYKESVLIDHIMVL
GENRKFPSALIVPNFEALKSWCTKKGITYTTAIEMVQNAQVLEKYNQEIVNGSKDFGKWE
QVKRFVLLTKPWSIEGGEFTPKLSLKRKIILEKNKDLIEKMYKDAESYKSEK
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtaactgtaacaagagtatttgatttacttaaatacaacttagagaaattccca
aaagatgagtttattagtggaaagagtaatggggtatggaaaaaatatagcactcagcag
ttttctgatacagctgacaacctgagtaaagggttgttgcaactcggcatggtcaaaggg
gacaggatcgctgtaatgtctcataacagaccagaatggaatattgcagattttgctgta
aatcagtttggtggttatcatgtacccttatatcctacactggctgaacacgatattaaa
tttattctggaaaatgcaggtgtaagcgtagtctttgtagaagatgagaccttattcaaa
aaagtcaagccaattggtgaagctgtgaatcctgatcttaggatttatacttttaatgaa
gttgcaggtgcaaaccactggagcactttggtagaagcaggagcaaagagccaggaattt
gatctggaaacttatcgtgcagcagtaactccggatgatgtgctgaccctgatctacacc
tctggtactaccggaactccaaaaggcgtgatgctgactcatcataatctggttcagaat
tttataaactctgcggtggtggttccacgtggtctggaaaacgcactcagctttttgccg
ctgtcacatatttttgagcgaatgatcatctatctgtatctttatatgggggtatcggtt
tattatgctgagagcatggataccattgttgcagatattcaatctgttaaaccgaatgct
ttttctactgttccaaggttactggaaaaggtatatgataaaatcatggaaaaaggtaag
gcgcttacaggagttaaaagaggtattttcttttggtcagtcgcattggctgaacagtat
gatatgaagagtggttggttttacaactttaaactcggaattgccagaaagttggtattt
aagaaatggcaggaggcgctgggtggaaatattgtcgtgattgtttctggtggtgccgca
ttaaatccacgtctggcacgtattttctgggcagcgggaatgcctgtttttgaaggttat
ggattgacagaaacttcaccggttattactgttaatcatttagagaatgccatgtttggt
actgtcggtcctgtgatcgatggggtagaagttaagatcgctgctgatggagaagtgctg
accagggggcataatgtgatgaaaggctattataagcgggaagatctgactgcagaagcg
attgataaggacggctggtttcataccgaagatatcggagaactggtcaacggaaaattc
ctgaaaattactgatcgtaaaaaagaaatctttaaaactgctggtggtaagtatgttgcg
ccacaaatgctggaaaataagtataaagaatcagtactgattgaccatattatggtattg
ggagaaaatcgtaagttcccgtctgcgttaattgtaccaaattttgaagccttaaaatcg
tggtgtactaaaaaagggattacatatactactgctattgaaatggttcaaaatgctcag
gttctggagaaatataatcaggaaattgttaatggatctaaagactttggcaaatgggaa
caagtgaaacgttttgtgttactcactaagccctggagtattgaaggaggtgaatttact
cctaagttaagtttaaaaaggaaaattattctggagaagaataaagatttaatagagaaa
atgtataaggatgcagaaagctataaatctgaaaaatag
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