Pedobacter sp. WC2423: AB3G38_14660
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Entry
AB3G38_14660 CDS
T10715
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
pedo Pedobacter sp. WC2423
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pedo03009
]
AB3G38_14660 (der)
Ribosome biogenesis [BR:
pedo03009
]
Prokaryotic type
GTPases
AB3G38_14660 (der)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
RsgA_GTPase
AIG1
Roc
AAA_22
PduV-EutP
SRPRB
ABC_tran
Ras
TniB
AAA_16
Arf
AAA_18
cobW
Gtr1_RagA
Guanylate_kin
AAA_24
NB-ARC
AAA
NTPase_1
ATPase_2
URGCP_GTPase
AAA_14
Ligase_CoA
RNA_pol_Rpb5_N
Motif
Other DBs
NCBI-ProteinID:
XDC09187
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All DBs
Position
3563576..3564877
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AA seq
433 aa
AA seq
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MSNIIAIVGRPNVGKSTLFNRLTESRKAIVDDFSGVTRDRHYGVAEWTHKQFTVIDTGGY
VANSEDLFEAAIREQVVIAIEEASVILFMVDVITGITDLDDEIAQLLRRSKKPVFIVVNK
VDNTSLENDAAVFYGFGLGDIYSISSMTGSGTGDLLDDVISHFEDDVVEENALPKLTIVG
RPNVGKSSLINALMGQDRNIVTPIAGTTRDSIHIHYNQFGHEFMFIDTAGLRKKTKVKEN
IEFYSVMRTIKALEEADVVLLMIDAVDGLESQDVNIFHLAEKNKKGIVILVNKWDLVEKD
HKTMKAFEEQIRVKLQPFTDIPIVFTSVLSKQRIFKAVETALEVFKNRGKKIPTSKLNDV
MLPIIEKYPPPALKGKYIKVKYVTQINATSPMFAFFCNLPQYIKEPYKRFIENKLRENFD
FSGAPIQIYFRQK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacattatcgcaatcgtcggaagaccaaacgtaggcaaatctaccctttttaat
cgcttaactgaaagtcgtaaagcaattgttgatgatttcagtggtgtaacacgcgatcgc
cattatggcgttgctgaatggacacacaaacaatttactgtaattgacacaggaggttat
gtagcaaattctgaagatctgtttgaagcggcaatccgcgaacaagtagttatcgcgatc
gaagaagcttccgttatcctgtttatggttgacgtaatcactggaattacagatttagat
gatgaaatagcacagctattacgccgcagtaaaaaaccggttttcattgtcgtaaataaa
gtagacaatacttcattagaaaatgatgcagctgtattctacggatttggccttggagat
atttattcgatctcttcgatgacaggttcaggtacaggtgacttactggatgacgtgatc
tcacattttgaagatgacgtagtcgaagaaaatgctttaccaaaactgactatagtcggc
agaccaaatgtgggtaaatcttccctgatcaacgccttaatgggccaggatagaaatatt
gttaccccaattgcaggtacaacacgtgattccatccatattcactacaatcagttcgga
catgaatttatgttcatcgacaccgcagggcttcgtaaaaaaacaaaagtaaaagagaac
atcgagttttattctgtaatgcgtactatcaaggctcttgaagaggctgatgtggtattg
ctaatgatagatgctgttgatggcttagaatctcaggacgttaatattttccacttagca
gagaagaacaaaaaaggtatcgtaattctggttaacaaatgggatttggtagagaaagat
cataaaacgatgaaagctttcgaagaacagattcgtgttaaattacaacctttcacagat
atcccaatcgtattcacttcagtattgagcaaacaacgtattttcaaagcagttgagacg
gcattagaagtgttcaaaaacagaggaaagaaaattcctacctcgaaactgaacgatgtg
atgcttccgatcattgaaaaatatccgccaccagcattaaaaggaaaatacattaaagta
aaatacgtgacgcagatcaatgcaacttcaccaatgtttgctttcttctgtaaccttcct
caatatatcaaagaaccgtataaacgtttcattgagaataaattacgtgagaacttcgac
tttagcggagcaccaatccagatctacttcagacagaaatag
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