Pedobacter sp. WC2423: AB3G38_15110
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Entry
AB3G38_15110 CDS
T10715
Name
(GenBank) NAD-dependent epimerase/dehydratase family protein
KO
K17947
dTDP-L-rhamnose 4-epimerase [EC:
5.1.3.25
]
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo00523
Polyketide sugar unit biosynthesis
pedo01110
Biosynthesis of secondary metabolites
pedo01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
AB3G38_15110
Enzymes [BR:
pedo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.25 dTDP-L-rhamnose 4-epimerase
AB3G38_15110
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
RmlD_sub_bind
adh_short
NAD_binding_10
KR
NAD_Gly3P_dh_N
DAO
NmrA
Ldh_1_N
F420_oxidored
Hpr_kinase_C
UDPG_MGDP_dh_N
NAD_binding_8
NAD_binding_2
DUF4246_N
Pyr_redox
G1_gp67_N
Motif
Other DBs
NCBI-ProteinID:
XDC09277
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Position
complement(3676619..3677755)
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AA seq
378 aa
AA seq
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MKNILITGGAGFIGSNLALALIKKGHKITVLDNLSPQIHGENPLETSPLYLSIKDKVKFI
SGTVTSKKDWEAAIKDQDIIVHYAAETGTGQSMYEIQKYVDVNVNGTAIMLDLLANQPHQ
VKKIVIASSRSIYGEGKYRSAEKGIVYPKHRTSAAMDKGDFEVKYADDQEDLELLATDEE
SKIHPSSVYGITKQNQEQMIMTVCPTLGISPVAFRYQNVYGPGQSLKNPYTGILSIFSTQ
IKNGNGINIFEDGKETRDFVFIDDVVNATILGIENPAADGEVFNVGTGVPTDVITVATTL
VKNYGVEVPITITGNYRLGDIRHNFADMTKIEAKLGFKPAYTFEQGIQEFTNWVNGQEVE
NDNYAQSIHEMKSRGLLK
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatatattgattactggtggagctggttttattggaagtaatttagccctggca
cttataaaaaaaggtcataaaattacagttttagacaatttatctcctcaaattcacggt
gaaaacccattagagacatcccctttataccttagcataaaagataaagttaaatttata
tcaggaacagttacttctaaaaaggactgggaagcagcaattaaagatcaggatattatc
gttcattatgcagcagaaacgggtactggacaatctatgtatgaaattcagaaatacgtg
gatgtgaatgtaaacgggacggcaatcatgcttgacttgctggctaatcagcctcatcag
gttaaaaaaattgtgattgcatcttccagatcaatttatggtgaaggtaaatacagaagt
gctgaaaaagggattgtttatcctaagcaccgtacttcggcagcgatggataagggtgat
ttcgaagttaaatatgctgatgatcaagaagatttagagctgttagctactgatgaagaa
tcaaaaatacatccttcttcagtttatggaattacaaaacagaatcaggagcaaatgatt
atgacagtgtgtcctacgctgggaatttcgccagtagcattcagatatcagaatgtatat
ggcccgggacaatcattaaagaatccatatacaggcatcttatctatcttttctacgcag
atcaagaatggaaatggaattaatatttttgaagacggtaaagaaacaagagattttgtt
tttattgacgatgtggtaaatgcgacaattttaggaattgaaaacccggctgccgatggt
gaagtatttaacgtcggtacaggagtgccaactgacgtgatcactgtagctactacattg
gtaaaaaactatggggtggaagttccgatcacgattaccggaaattatcgtttaggagat
atcaggcataattttgctgatatgaccaagattgaggcgaaattagggtttaagccagct
tatacttttgaacagggtattcaggagtttaccaactgggtaaacgggcaggaagtagaa
aatgataattatgcacagtcaattcatgagatgaaaagtcgtggattgttaaaataa
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