Pedobacter sp. WC2423: AB3G38_17485
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Entry
AB3G38_17485 CDS
T10715
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pedo Pedobacter sp. WC2423
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pedo02000
]
AB3G38_17485
Transporters [BR:
pedo02000
]
Other transporters
Pores ion channels [TC:
1
]
AB3G38_17485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
TonB_dep_Rec_b-barrel
CarboxypepD_reg
Plug
PEGA
SpaA
fn3_3
EMC7_beta-sandw
Motif
Other DBs
NCBI-ProteinID:
XDC09730
LinkDB
All DBs
Position
complement(4195933..4198383)
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AA seq
816 aa
AA seq
DB search
MKTLLIAVIAVFLLPVFASAQFTISGSVSEKTKQTSLPGASVSLKNTNIGSSSNAQGAYE
LKNVKAGKYVLTVSFVGYETQHKTIEVNGDQHIDFTLEPSAYLADEVIVMATRATEKSGT
TYKNVSKSDIEANNFGQDLPFIINNTPGVVVTSDAGTGVGYTGIRIRGSDATRVNVTVNG
IPLNDAESQGSFWVNMPDFASSVESIQIQRGVGTSTNGAGAFGGSLNIQTSAPGLEPYAE
VNSTYGSFNTLKNTVKIGTGLIDNKFSFDGRLSRIQSDGFVDRGASLLKSYFLSGAYHGK
TDLLRINVFSGSEKTYQSWNGVPESKLRGDVQGINDYIARNEITGADATNLLTADNRKYN
SFLYKDQNDNYWQDHYQVLYAKQFNDRFSFNGALHYTYGRGYYEEFKAKQKFADYGLENP
IINGAPVLITDLVRRRWLNNNFYGATYSFNYKASSQLNFTVGGAYNQYRGQHYGQINWSQ
TSSNLNNSDHYYDGDGNKNDFNIFAKVSYSPVEKLNLFADLQYRRLNYDITGNDNDLLPL
NIHDKLNFFNPKLGASYFLNPKSNLYASLSIANKEGNRDDYVNANVGTLPHPERLYNAEA
GYRIKDAQYSAGVNVYGMFYKDQLVVTGKLSDVGAPIRQNVPNSSRIGVEFDGSYTLSRH
FLMNANAAWSRNKIKDFSEFIYNYDTKKEDTYNYTNTTISFSPDAVLFGELVYKPFTSFA
VALQSKYVSKQYMDNTQNEGRKLNGYWVNNVRLGYDFSFKGVKNMNIGLLVNNILDKKYE
SNGYTYGSYSGGNRVTENFYFPQAGTNLLLSLNVKF
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacattattgatcgcagttatagctgtgttccttttaccagtatttgccagcgcg
caattcacaatttcgggatcagtttccgaaaaaacaaaacagaccagtttaccaggagca
agtgtcagcttaaaaaacactaatattggttccagcagcaatgctcagggagcatatgag
cttaaaaatgttaaagcgggtaagtatgtgctgaccgtaagttttgttggttatgaaaca
cagcacaaaactattgaagtcaatggagatcagcatatcgatttcaccctggagccttca
gcatatcttgcagatgaagttattgtcatggcgacaagggctacagaaaagtcaggtacg
acttataagaatgtcagcaaatctgatattgaagccaataatttcggacaggatttacct
ttcatcatcaacaatacgccaggtgtggtggttacttctgatgcaggaaccggagtaggt
tacacaggtatccggatcagggggagtgatgcgacaagggtcaacgttacagttaacgga
attcctttaaatgatgcggaaagtcaaggttcattctgggtaaatatgcctgattttgct
tcctcagtagagagtattcagattcagcgtggcgtgggaacttctacaaatggtgcaggt
gcctttggcggaagcctgaacatacagacctctgcaccaggtttagaaccttatgcagaa
gttaacagtacctatggttctttcaacactttaaaaaacacagtgaaaatcggaacagga
ttgattgataataaattcagttttgatggccgtttgtcccggatacaatctgatggtttt
gtagaccgtggcgcatccttattaaaatcttatttcctgtctggcgcctatcatggcaaa
actgatctgttacggatcaatgtcttttctggttcagagaaaacttaccagtcctggaat
ggtgttcccgaatcgaagttaagaggtgatgtgcaggggatcaatgattatatcgcaaga
aatgagataaccggagctgatgcgacaaacttattaactgcagataacaggaagtacaat
tcattcttatacaaagatcaaaatgataactactggcaggatcattaccaggtattgtat
gcgaaacagtttaatgacaggttctcttttaatggggccttacattacacttatggaaga
ggctattatgaagagtttaaagcaaaacaaaaatttgccgattatggcttagagaacccg
attattaacggcgcaccagtattgataacggatcttgtccgcagacgctggttaaacaat
aatttttacggcgcaacttacagtttcaattacaaagcgtcttctcaactcaatttcaca
gtaggtggtgcttataaccaataccgcgggcaacattacgggcaaatcaactggtcacaa
acctcttcgaacctgaataactctgatcattattatgatggagacggaaataaaaatgat
ttcaatatttttgcgaaggtttcttacagcccagttgaaaaactgaacttatttgcagac
ctgcaatacagaagattgaattacgatatcacaggtaatgacaatgatttattgccttta
aatatccatgataagctgaacttcttcaatcctaaacttggtgcatcttactttttaaat
ccaaaaagcaatctctatgcttctttaagtattgccaacaaggagggtaaccgcgatgat
tatgtgaatgcaaatgtgggtactcttccacatcctgaaaggttgtataatgcagaagcc
ggataccggatcaaagatgcacaatacagtgcgggcgtaaacgtatatggcatgttctac
aaagatcagctggtagttaccggaaagctaagtgatgtgggtgctccgatccgtcagaat
gttcctaacagttccagaattggagttgaatttgatggatcctatactttaagccgtcat
tttctgatgaatgccaatgctgcatggagcagaaataaaattaaagacttctctgagttc
atttataattatgatacgaaaaaagaggatacctacaattacacgaatactactatttct
ttttcaccggatgcggtattattcggggagctggtttataaaccgtttaccagtttcgct
gtagctttacaaagcaagtacgtgagcaaacagtatatggacaatacacagaatgaaggc
agaaagttgaatgggtactgggtaaacaatgtccgtttaggttatgatttcagctttaaa
ggggtgaaaaatatgaacatcggtttactggttaacaacattctggataaaaagtatgag
agtaatggatatacctatggatcttatagtggtggtaaccgtgtaacagagaatttctat
ttcccgcaggcaggaaccaacttattattatccttaaatgttaagttttaa
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