Pedobacter sp. WC2423: AB3G38_17510
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Entry
AB3G38_17510 CDS
T10715
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo00220
Arginine biosynthesis
pedo00240
Pyrimidine metabolism
pedo00250
Alanine, aspartate and glutamate metabolism
pedo01100
Metabolic pathways
pedo01110
Biosynthesis of secondary metabolites
pedo01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
AB3G38_17510 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
AB3G38_17510 (carB)
00220 Arginine biosynthesis
AB3G38_17510 (carB)
Enzymes [BR:
pedo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
AB3G38_17510 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp_4
GARS_A
ATPgrasp_Ter
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
XDC09735
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Position
4200873..4203689
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AA seq
938 aa
AA seq
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MPKDTSIRSVLIIGSGPIIIGQACEFDYSGSQAALSLKEEGIEVSIINSNPATIMTDKII
ADHVYLRPLTVDSIEQILIERKIDAVLPTMGGQTALNLCKEAEERGVWEKHGVRVIGVDV
AAIEKTENREAFRQLMVDIGVGVAPSKIANSFLEGKEAAQEIGYPLVIRPSYTLGGSGGG
FVHKKEEFDAALKRGLEASPTHEVLVEKAVLGWKEYELELLRDSNDNVIIICSIENFDPM
GIHTGDSITVAPAMTLSDTCYQEMRNQAIKMMRAIGTFAGGCNVQFSVNPDNDDIIAIEI
NPRVSRSSALASKATGYPIAKIASKLAIGYNLDEIENQITKTTSAYFEPTLDYVIVKIPR
WNFDKFKGANMELGLQMKSVGEVMAIGRSFIEALQKACQSLEIGRAGLGADGKHNRSIEE
IMHGLEHPSWNRLFLIKDAMSMGVPLESIRKVTRIDKWFLAQIQELVQLETELKRYSLNN
IPKEFFFTLKQKGFSDIQIAYLLGNVTEDEVYDRRKSLGIRRVYKMVDTCAAEFSAQTPY
YYSTFEEENESIPTDKKKIIVLGSGPNRIGQGIEFDYSCVHGLLAAKESGFESIMINCNP
ETVSTDFNMADKLYFEPVFWEHVREIIELENPVGVIVQLGGQTALKMAEKLHENGIKIIG
TSYNDMDVAEDRGRFSDLLKELDIPYPKYGVAENAEEAIVVANEVGYPVLVRPSYVLGGQ
GMSIVINDEDLEKAVVKLLGDLPGNRVLIDHFLDRAEETESDSICDGDDVHIVGLMEHIE
PAGIHSGDSFAVLPPFSLSAKVMESMETYSKKIARALNVIGLLNIQFAVKDEKVYVIEAN
PRASRTVPFIAKAYDVPYINIAAKIMLGVNKLKDFTIERKLEGYAIKEPVFSYDKFPEVP
KELGPEMKSTGESIRFIKDLEDPYFRKLYKDKSMYLSK
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagacacctccatacgttcagtattgattatcggttccggacctattattatt
ggccaagcctgtgagtttgattactccggatcccaagctgccttatccttaaaagaagaa
ggaattgaagtttctattataaactccaatcctgcaacgattatgaccgataagatcatt
gcagaccatgtttacctcagacctttaacggtagactctattgagcagattttaatagag
cggaaaattgatgctgtattaccaacaatgggagggcaaactgccttaaacctttgtaag
gaagctgaagagcgtggtgtttgggaaaaacatggcgttagagtaattggcgttgatgtt
gctgcaattgaaaaaacagaaaacagagaagctttccgccagttaatggtagatataggt
gtgggtgttgcaccctcaaaaattgcaaactctttccttgaaggtaaagaagctgcacag
gaaattggctatccgctggttatccgtccttcttatacactgggtggatcaggtggtggt
ttcgtgcacaagaaagaagagtttgatgctgcattgaaacgtggtcttgaagcttctcca
acacacgaagtattagtagaaaaagccgttttgggctggaaagaatatgagctggagtta
ttaagagacagtaatgataatgtgattatcatttgctcgattgaaaactttgacccgatg
ggtattcacactggtgactctattacagtagcaccagcaatgactttgtctgatacctgt
taccaggagatgcgtaaccaggctatcaaaatgatgcgtgcgattggtactttcgcaggt
ggttgtaacgtacagttctcagttaaccctgataacgacgatatcatcgctatcgaaatt
aacccgagggtttcccgttcatccgcactggcaagtaaagcaactggttatccgattgct
aaaattgcttctaaactggcgatagggtataacctggatgaaatcgaaaatcagattact
aaaactacttcagcttactttgagccgactttagattatgtaatcgttaaaataccacgc
tggaactttgataagttcaaaggtgcaaacatggaattaggcttacagatgaaatctgtt
ggtgaagttatggctattggccgcagctttatcgaagcccttcaaaaagcatgtcagagt
ttagaaatcggacgcgctggtttaggtgccgacggaaaacacaacagaagtatcgaagag
attatgcacggtttggaacatccaagctggaaccgcttattcctgatcaaggatgcaatg
agcatgggcgttccattggagtctatccgtaaagttaccagaattgataagtggttcctg
gcacagatccaggaactggtacagctggaaacagaattaaaacgttattcattaaataat
ataccgaaggaattcttctttaccctgaaacaaaaaggattctctgatatccagattgct
tacctgctaggtaatgtaactgaggatgaggtttatgaccgcagaaaatcattgggaatc
agaagagtttataaaatggtagatacttgtgctgctgagttctctgcacaaactccatac
tactactcaacttttgaggaagagaatgaatctattcctacggataaaaagaaaattata
gtattaggatcaggcccgaaccgtattggtcagggtattgaattcgattactcttgcgtg
catggtttactggcagcaaaagaaagcggatttgaatcgattatgattaactgtaaccct
gaaacggtttccacagatttcaatatggctgataagttatactttgagccggtattctgg
gaacatgtacgtgaaatcatcgaactggaaaacccggtaggtgtaattgtacaattaggt
ggtcagactgctttgaaaatggcagaaaagcttcatgagaatggtattaagattatcggg
acatcttacaacgatatggatgttgctgaagatcgcggccgtttctcagacttgttaaaa
gaactggatattccttaccctaaatatggtgtggcggaaaatgcggaagaagctatcgtg
gtggctaatgaagtaggttacccggtactggttcgtcctagttatgtattgggtggacaa
ggaatgagtattgtcatcaacgatgaggatctggaaaaagcagtcgtgaagttattaggt
gatttacctggtaacagagtgctgattgatcatttccttgacagagcagaagaaacggag
tcagattcgatttgtgatggtgatgatgtgcatattgtaggtttaatggaacacattgag
ccagctggtatccactccggagattcatttgcagtattaccgccattcagtctttctgct
aaagtaatggagagcatggagacttactctaagaaaattgccagagcattaaatgtaatc
ggtttactgaacattcagtttgctgtgaaagacgaaaaggtttatgtgattgaagcgaat
ccaagagcttccagaactgttcctttcatcgctaaagcatacgatgttccttatatcaat
attgcagctaaaatcatgttaggtgtcaacaaactgaaagacttcacaattgaacgtaaa
ttagaaggttatgccattaaggaacccgttttctcttacgataaattcccggaagtacct
aaggagttaggccctgagatgaaatcaactggtgaatctatccgttttatcaaagacctg
gaagatccgtatttcagaaagttgtataaagacaaatcgatgtatttatcaaaataa
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