Pedobacter sp. WC2423: AB3G38_17540
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Entry
AB3G38_17540 CDS
T10715
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pedo Pedobacter sp. WC2423
Brite
Messenger RNA biogenesis [BR:
pedo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AB3G38_17540
Ribosome biogenesis [BR:
pedo03009
]
Prokaryotic type
rRNA processing factors
AB3G38_17540
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XDC09741
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Position
complement(4210049..4211599)
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AA seq
516 aa
AA seq
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MVKELIIDSSPTGVTIALIEDKQLVELHKEHINTNYAVGDIYLGRIKKIMPGLNAAFVDV
GYEKDAFLHYFDLGPQVQSLLKLTKIKRNGTVSGTLLDNLKLEADINKAGKISEVVSKNM
LIPVQIAKEPISTKGPRLSSDLSIAGRYIVLVPFSNVISISKKIKSNTERNRLKKIIESI
KPKNFGVIIRTVSEGKGVEELQKDLLDSVSKWENFIKKLPEAEPSKRVWGEMDRTSTLIR
DILSVDFTNVYVNDAGLFEDIRSYVHEISPEMEKIVKPYKHKEPIFEHFGIEKQIKNGFG
KTVNLAGGAYLVVEHTEALHVIDVNSGNRTANKENQEDNALQVNKEAAKEIARQLRLRDM
GGIVVIDFIDMHKPVNRKMLFDYLRELMLLDRAKHTILPPSKFGLVQITRQRVRPEMNIV
TSEVCPMCHGTGEIKASIVLMDDIESNMNYILREQNEKNITLCVHPYIEAFIKKGVYSLQ
WKWFFKFGQKIKVKAVPSYLLTEFHFISSKDEEIKL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaaggaattaattatcgattcgtctcctacgggagtaaccatagctttgattgaa
gataaacaacttgtagaacttcataaagaacacatcaacacaaattacgccgtaggcgat
atttatttaggccgcataaagaaaattatgccgggactaaatgctgcgtttgttgatgtg
ggttatgagaaagatgcttttttgcattatttcgatcttggtccgcaagttcaatcttta
ttaaagcttacaaaaattaagcggaatggcactgttagtgggacgttattagacaattta
aagcttgaagccgatattaataaggctggcaaaatatctgaggtcgtttccaaaaacatg
cttatacctgttcaaatagctaaagagcctatttcaacaaaaggaccgcgtctaagctct
gatctttctattgcaggacggtacattgtattagtcccattttctaatgtaatatcaatc
tcgaaaaaaattaagagtaatacagaacgtaatcgtttaaaaaagattattgaaagtatt
aagcctaaaaacttcggtgtgatcatcagaacagtttctgaaggcaaaggggttgaagaa
ttgcaaaaagacttattggattctgtctcaaagtgggaaaatttcattaagaaattacct
gaagctgagccttccaaacgtgtttggggagagatggacagaacgtcaacgttaattcgt
gacattttaagtgttgacttcactaacgtttatgtgaacgatgcaggcttgtttgaagat
atccgttcttacgtgcatgaaatttctccggaaatggagaaaatagtaaaaccttacaag
cacaaggaacctatattcgagcatttcggaattgaaaaacaaattaagaatggctttggc
aaaaccgtaaatcttgccggtggagcttatcttgttgttgaacataccgaggctcttcac
gtgatcgacgttaacagcggtaacagaacagctaataaagaaaaccaggaagacaatgcc
ttacaggtaaacaaggaagctgcaaaggaaattgcgcgtcagctcagactacgtgatatg
ggtggtattgtagtgatcgattttatcgatatgcacaaaccagtaaaccgtaaaatgtta
tttgactatctgcgtgaactgatgttactggatcgtgctaaacacactattctgcctcca
agtaagttcggccttgtgcaaattacacgtcagcgtgttcgtcctgagatgaacattgtg
accagtgaagtttgtccaatgtgtcatggtactggtgaaattaaagcgagtatcgtttta
atggatgatattgaaagtaatatgaactacattttgcgtgagcagaatgaaaaaaacatt
acgctttgtgtacacccgtatatagaagcctttatcaaaaagggtgtttactccctgcaa
tggaagtggttctttaaattcggacagaaaattaaagttaaggcagttccgtcttactta
ttaacagagtttcattttatatcctctaaagacgaagaaataaagttataa
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