KEGG   Pedobacter sp. WC2423: AB3G38_17555
Entry
AB3G38_17555      CDS       T10715                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
pedo  Pedobacter sp. WC2423
Brite
KEGG Orthology (KO) [BR:pedo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pedo03032]
    AB3G38_17555
   03036 Chromosome and associated proteins [BR:pedo03036]
    AB3G38_17555
   03400 DNA repair and recombination proteins [BR:pedo03400]
    AB3G38_17555
DNA replication proteins [BR:pedo03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    AB3G38_17555
Chromosome and associated proteins [BR:pedo03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    AB3G38_17555
DNA repair and recombination proteins [BR:pedo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      AB3G38_17555
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: XDC09744
LinkDB
Position
complement(4212725..4213027)
AA seq 100 aa
MTKADIISEISTKTGIEKVDVQETVEAFFKVIKSSMIGGENVYVRGFGSFVVKKRAQKTA
RNISKNTAIIIPEHFVPSFKPAKVFVDKVKNNSKKLSVEA
NT seq 303 nt   +upstreamnt  +downstreamnt
atgactaaggcagatattatttcagaaatatcaacgaaaacaggaattgaaaaggtagat
gtacaggaaaccgttgaggcgtttttcaaagtaatcaaaagcagtatgatcggtggcgaa
aatgtctatgttaggggttttggaagttttgttgttaagaaaagagcacaaaaaactgcc
agaaatatttcaaaaaacactgcgattattattccggagcattttgtaccaagtttcaaa
ccagcaaaagtttttgttgataaagtaaaaaacaattcaaaaaaactaagcgtagaagct
taa

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