Pedobacter sp. WC2423: AB3G38_17555
Help
Entry
AB3G38_17555 CDS
T10715
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pedo Pedobacter sp. WC2423
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pedo03032
]
AB3G38_17555
03036 Chromosome and associated proteins [BR:
pedo03036
]
AB3G38_17555
03400 DNA repair and recombination proteins [BR:
pedo03400
]
AB3G38_17555
DNA replication proteins [BR:
pedo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AB3G38_17555
Chromosome and associated proteins [BR:
pedo03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AB3G38_17555
DNA repair and recombination proteins [BR:
pedo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AB3G38_17555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
XDC09744
LinkDB
All DBs
Position
complement(4212725..4213027)
Genome browser
AA seq
100 aa
AA seq
DB search
MTKADIISEISTKTGIEKVDVQETVEAFFKVIKSSMIGGENVYVRGFGSFVVKKRAQKTA
RNISKNTAIIIPEHFVPSFKPAKVFVDKVKNNSKKLSVEA
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgactaaggcagatattatttcagaaatatcaacgaaaacaggaattgaaaaggtagat
gtacaggaaaccgttgaggcgtttttcaaagtaatcaaaagcagtatgatcggtggcgaa
aatgtctatgttaggggttttggaagttttgttgttaagaaaagagcacaaaaaactgcc
agaaatatttcaaaaaacactgcgattattattccggagcattttgtaccaagtttcaaa
ccagcaaaagtttttgttgataaagtaaaaaacaattcaaaaaaactaagcgtagaagct
taa
DBGET
integrated database retrieval system