Pedobacter sp. WC2423: AB3G38_17670
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Entry
AB3G38_17670 CDS
T10715
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AB3G38_17670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pedo02000
]
AB3G38_17670
Enzymes [BR:
pedo01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
AB3G38_17670
Transporters [BR:
pedo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
AB3G38_17670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA
AAA_22
IstB_IS21
DUF2291
AAA_16
ATP-synt_ab
nSTAND1
DUF4118
Motif
Other DBs
NCBI-ProteinID:
XDC09767
LinkDB
All DBs
Position
complement(4234421..4236247)
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AA seq
608 aa
AA seq
DB search
MKTYFRLLSFSKPIEKYAIPYALVTILAIFFNTLLFTLLGPLLETLFSSKAATAGPTLLE
KASAFDFIGHINAYINYTIENYGKLYTLKIVCGAIVICVFLANLFRYLSQRFMEDLRVHT
LLNLRKSVFNNVMDLHLGYFNNERKGDIISKVASDVQVVQGTVTNTLQVVFKEPVQLIFY
IVVLLSISLKLTLFSLLVIPVSGFIISKIVKRLKQQARESHESFARMIGFLDEALGGIRI
IKAFNATLRIKDKFHNENLVYSDLNRKMARRQQLASPVSQTLGVLVVVFIVLYGGSMILQ
HQGDLTPSKFLVYIATFSQVMQPVKALSDSFSSIHSGLAAGVRVLDLIDTKPELTDAENA
IQLQDFKETIRFENVSFNYGEKEVLKDVSFTVKKGQNIALVGPSGGGKSTMIDLIPRFYD
PKAGNIYFDNINLKDISLDSLRHQMGTVNQESILFNETIFNNIAFGKPDATKDEVIAAAK
IANAHDFILNTENGYETSIGDRGNKLSGGQKQRICIARAVLANPPIMLLDEATSALDTES
ERLVQDALNRLMENRTSIIIAHRLSTIQHADMILVVDNGKIVESGNHSALLNQNGLYRRL
IDMQTFAD
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaagacctattttagattattatccttttcaaagcctatagaaaaatatgctattcca
tatgctttggtaactatacttgctatatttttcaatacactcctatttactttactggga
ccgttactggaaacacttttttcttccaaggcagcaactgccggacctactttactggaa
aaagcctcagcatttgacttcatcggacacattaacgcctacatcaattatactattgag
aactatggcaaactatacacacttaaaattgtatgcggagccattgtaatctgtgtattt
ttagcgaatctttttcgctatctctctcagcggtttatggaagacctgagagtacacacc
ctgctaaatctgcggaaatcggtttttaacaatgtgatggatcttcatctgggctatttc
aataatgagagaaaaggtgatattatctcaaaagtcgcctcagatgtgcaagtcgtgcaa
ggcacagtaaccaacactttacaggtcgtattcaaagagcctgttcagcttatattttac
atcgttgtattgttatcaatttcgctgaaacttactttattctcacttttggtgatcccg
gtttcgggctttattattagtaaaattgttaaaagattaaagcagcaagccagagaatct
cacgaaagctttgcaagaatgattggatttttagatgaagcgctgggtggaatcagaatc
attaaagcatttaatgcaacgcttagaatcaaagataaattccataatgagaatcttgtc
tattcagatttgaacagaaagatggcacgaagacaacaattggcatcccctgtttcacaa
accctgggtgtattggttgttgtgtttatagtcctttatggaggaagtatgattctacag
catcagggagatcttaccccttcaaaatttctggtatacattgctaccttttcacaggtt
atgcagcctgtaaaagcactatctgattcatttagctctattcactcaggactggcagct
ggggtgagggtattagatcttatcgatactaaacctgaattgacagatgccgaaaatgcc
atacaacttcaggatttcaaagaaactatccgttttgaaaacgtgtctttcaattatggt
gagaaagaagtattaaaagatgtcagctttactgtaaagaaaggtcagaacattgcactt
gtaggtccatctggtggtggaaaaagtacaatgattgatttgatcccacgcttttatgat
cctaaagcaggaaacatctatttcgataacattaatttgaaagacatctctctggatagc
ctgagacaccaaatgggtactgttaaccaggaatcaattcttttcaacgagaccattttc
aacaatattgcttttggtaaacctgacgcaaccaaagatgaagttattgctgcagcaaaa
attgctaatgcacatgattttattctgaatacagagaatggttatgaaaccagtatcgga
gataggggaaataaattatcaggaggacagaaacaacgtatttgtattgccagagctgtg
ctagcaaatccgccgattatgctccttgatgaggctacatcggcactggatactgagtct
gaaagactagtacaggatgcactgaacagattgatggaaaacaggacatctattataatc
gcgcacaggctaagtacaattcagcatgcggatatgatacttgtggttgataatggtaaa
attgtcgaatccggaaatcactctgctttacttaatcagaatggtttatacagaagatta
atagatatgcagacctttgcagattaa
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