Pedobacter sp. WC2423: AB3G38_18130
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Entry
AB3G38_18130 CDS
T10715
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB3G38_18130 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pedo03019
]
AB3G38_18130 (groL)
03110 Chaperones and folding catalysts [BR:
pedo03110
]
AB3G38_18130 (groL)
03029 Mitochondrial biogenesis [BR:
pedo03029
]
AB3G38_18130 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pedo04147
]
AB3G38_18130 (groL)
Enzymes [BR:
pedo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AB3G38_18130 (groL)
Messenger RNA biogenesis [BR:
pedo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AB3G38_18130 (groL)
Chaperones and folding catalysts [BR:
pedo03110
]
Heat shock proteins
HSP60 / Chaperonin
AB3G38_18130 (groL)
Mitochondrial biogenesis [BR:
pedo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AB3G38_18130 (groL)
Exosome [BR:
pedo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AB3G38_18130 (groL)
Exosomal proteins of other body fluids (saliva and urine)
AB3G38_18130 (groL)
Exosomal proteins of breast cancer cells
AB3G38_18130 (groL)
Exosomal proteins of colorectal cancer cells
AB3G38_18130 (groL)
Exosomal proteins of bladder cancer cells
AB3G38_18130 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Pho88
Motif
Other DBs
NCBI-ProteinID:
XDC09857
LinkDB
All DBs
Position
complement(4336875..4338515)
Genome browser
AA seq
546 aa
AA seq
DB search
MAKQVKYNVEARDALKRGVDTLANAVKVTLGPKGRNVIIDKKFGSPAITKDGVTVAKEIE
LKDPIENMGAQMVKEVASKTADIAGDGTTTATVLAQAIVTAGIKNVAAGANPMDLKRGID
KAVTAIVANLKAQSQTVGEDNNKIKQVASISANNDEVIGALIAEAMGKVGKDGVITVEEA
KGTETEVKTVEGMQFDRGYLSPYFVTNADKMEAELENAYILIYDKKISNMKELLPILEKQ
VQTGKPLLIIAEDLDGEALATLVVNKIRGSLKVVAVKAPGFGDRRKAMLEDLAILTGGTV
ISEERGYKLENADLTYLGTAEKIVVDKDNTTIINGAGSSEDIKARVNQIKAQIETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVAFI
RAIEALEGMKGSNEDETTGIAIVKRAIEEPLRQICQNAGIEGSIVVQKVKEGKGDFGYNA
RTDVYENLISAGVIDPTKVGRVALENAASIAAMLLTTECVLADDPDDNAAGSAMPPMGGG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcaagtaaaatataacgtagaagcccgtgacgccctgaaaagaggtgttgat
actttggctaatgcagtaaaagtaactttaggtccaaaaggacgtaatgtaattattgat
aaaaaattcggttcaccagcaattacaaaagatggtgttactgttgcgaaagaaattgaa
ttaaaagacccaatcgaaaacatgggtgctcaaatggttaaagaggttgcttctaaaact
gctgatattgcaggtgacggaacaactactgcaactgtactggctcaggcgatcgttaca
gcgggtatcaaaaacgttgctgctggtgcaaatccaatggatttgaaacgcggtatcgat
aaagcggttacagctattgtagcaaacttaaaagctcagtctcaaactgttggtgaagat
aacaacaaaatcaaacaggttgcgtctatctctgcaaacaatgacgaagttattggcgcg
ctgatcgctgaggcaatgggtaaagtaggtaaagatggtgtaattactgtggaagaagca
aaaggtactgaaactgaagtaaaaacagtagaaggtatgcaatttgaccgtggttactta
tctccatactttgtaactaatgcggataaaatggaagcggaattagaaaacgcttacatt
ttgatctatgacaaaaaaatcagtaacatgaaagaattgttaccgattttagagaaacaa
gttcaaactggtaaaccattattaattatcgctgaagatttagatggtgaagctttggct
actttagtagtgaataaaatccgtggttctctgaaagttgttgctgttaaagctccaggt
tttggtgaccgcagaaaagcaatgttagaagatcttgctatcttaacaggtggtactgta
atttctgaagaaagaggttacaaattagagaatgctgaccttacttatttaggtactgct
gagaaaatcgttgttgataaagacaatacaacaattattaacggtgctggttcatctgag
gatatcaaagcccgcgttaaccagatcaaagctcagatcgaaactacaacttctgattac
gataaagaaaaattacaagagcgtttggctaaattagctggcggtgttgcagttctttac
gtaggtgcagcttctgaagtggagatgaaagagaaaaaagaccgtgttgatgatgcttta
catgcaacccgtgcggctgttgaagaaggtatcgttgctggtggtggtgttgctttcatc
cgtgctatcgaagctttagaaggaatgaaaggatctaacgaagacgaaactactggtatc
gcaatcgttaaacgtgctatcgaagagccattacgtcaaatctgccagaatgcaggtatt
gaaggttctatcgtagttcaaaaagttaaagaaggtaaaggtgatttcggttacaatgcc
cgtactgatgtttatgaaaacttaatcagtgcaggtgttatcgatccaactaaagttggt
cgtgtagctttagaaaacgcagcttctattgcagcgatgttgttaacaactgagtgtgta
ttagctgatgatcctgatgataatgcagcaggttctgctatgcctcctatgggtggcggt
ggaatgggcggaatgatgtaa
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