Pedobacter sp. WC2423: AB3G38_18680
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Entry
AB3G38_18680 CDS
T10715
Symbol
rsmI
Name
(GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
pedo Pedobacter sp. WC2423
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pedo03009
]
AB3G38_18680 (rsmI)
Enzymes [BR:
pedo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
AB3G38_18680 (rsmI)
Ribosome biogenesis [BR:
pedo03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
AB3G38_18680 (rsmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
DUF374
Motif
Other DBs
NCBI-ProteinID:
XDC09966
LinkDB
All DBs
Position
complement(4455377..4456087)
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AA seq
236 aa
AA seq
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MGGKLFLVPTPIGNLEDMTFRAVRVLKEADVILAEDTRTSAPLLKHFSIDKKAYSHHQHN
EHKATSEIIKFLKEGKNVALISDAGTPAISDPGFFLVREVLKNDLPVECLPGATAFVPAL
VNSGLPTDSFVFEGFLPVKKGRQTRLKKLADEERTIVLYESPHRLLKTLEEFAQFFGEER
QASVSRELTKMYEETVRGTLVEIKSHFENNILKGEFVICVAGKEETKKEKRSYEKD
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgggcggtaaactatttctggttcctacaccaatcggcaatctggaagatatgactttc
agggctgtccgcgttttaaaggaagcagatgttatcctggctgaggatacccgtacaagt
gcgcctttactgaagcatttcagcattgataaaaaagcgtattcgcatcaccagcacaat
gagcacaaggctacttcagaaattattaagtttctgaaggaaggcaaaaatgtagcgctg
atttcggatgccggaacacctgcgatctccgatccgggcttctttctggtcagagaagtg
ttaaaaaatgatttaccggtagaatgtttaccaggtgcaactgcttttgtacctgcactc
gtcaactcaggtctacctacagattcatttgtttttgaaggatttcttcctgttaaaaag
ggcagacaaacccgtttgaagaaacttgctgacgaagagcgaacaatcgtcctttatgaa
agtccgcaccgtttattaaaaacactggaagaattcgcccagttttttggagaagaaaga
caagcttcagtaagcagggagctgactaaaatgtatgaagaaaccgttagaggtacactg
gtagaaataaaatcacactttgaaaacaatattttaaaaggtgagttcgtaatttgtgtg
gcaggtaaagaagaaactaaaaaggaaaagcgctcttacgaaaaggattaa
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