Pedobacter sp. WC2423: AB3G38_20005
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Entry
AB3G38_20005 CDS
T10715
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pedo Pedobacter sp. WC2423
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pedo02000
]
AB3G38_20005
Transporters [BR:
pedo02000
]
Other transporters
Pores ion channels [TC:
1
]
AB3G38_20005
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
XDC10219
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All DBs
Position
complement(4795746..4797803)
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AA seq
685 aa
AA seq
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MKQLITLPLLVLTLTGFSQIKPDTTKKLEEVIIRPYFSAQPLLRTTGAVAILDKKALDRQ
PNSSLVTAVNTISGVRMEERSPGSYRLSIRGSLLRSPFGIRNVKIYFDEFPLTDAGGNSY
LNALDLSGIQNIQILKGPQSSIYGANSGGVVLIAPNTIATDSTQLSLNLTGGSFGLFHEN
LNLGQRWKNYTLNINQSYQRSDGFRDHSKMERKYLQVHQKWDYTPKSNLTALLFYSDLQY
ETPGGLTAAEYELNPRASRPAFGKTRSPAEQQAGIYSKTLYAGVTNNWQLNSQFKHVLSA
FTSYTDFKNPFLTNYEHRKEFTIGIRTYVEYFKKSEDITWRFNLGLEAAKTASNIENRDN
DYGTPGNLQASDRLKAMTDFSYAHLNVDIFQKLLLELSVSGNWYQYKYERRAPVADAQKT
KNFDLQFMPRAALSYLLNKELSLRGSVSRGYSPPTLAEIRASDNVINVDLQPESGWNYET
GIRYEIENRRLSLDLNSFYYQLKNAIVRRLNENGTEFFINAGGTKQWGLEAAASVWLILP
NKNTTIRGLSIKSAYTLSRFKFDHYLDRTVDLSGKDLTGVPKNVIVTSIDLQLPKGFYFF
LQHNYTSRIPLTDANTVYARAYHLVQSKIGWKELHIANTRVEIFAGAENLLNQNYSPGND
LNAAGGRYFNPAATRSFYAGLNIHF
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaattgattacacttccgcttctggtattaactttaacaggctttagtcagatt
aaaccagatacgacgaagaaacttgaagaggtcattattcgtccttatttttctgcacag
cccttgttaagaacaacaggggctgttgctattttagacaaaaaagcgctggaccggcaa
cctaacagctccttagtcactgctgtaaatacgatatcaggagtgcgcatggaggaacgt
tctccggggagctacaggttatctataaggggaagtttattacgctctccttttggcatc
aggaatgtgaagatctactttgatgaatttccattaactgatgcagggggcaacagctac
ctgaatgcgctggacttgtctggtatacaaaatattcaaattctgaaaggtcctcaaagc
agtatttatggcgctaattccggaggagttgtattaattgcacccaatactattgcgaca
gacagtacccagctttcattaaatcttacaggcggttcatttggtttgttccacgagaac
ctgaaccttggtcaaaggtggaaaaactacacccttaacattaaccagtcttaccagcga
agtgatggtttccgtgaccacagcaagatggaaaggaaatacttacaagtacatcaaaaa
tgggattataccccaaaatcaaatctgactgctttattattttatagtgatttacaatat
gaaaccccgggaggattaacagcagcagagtatgaattaaacccacgggcatcaaggccg
gcatttggaaaaaccagaagtccggcagaacagcaagcagggatttacagcaaaaccttg
tatgcaggtgtgacgaacaactggcaattaaattcacagtttaaacatgtgctttctgcc
ttcacttcttatacagatttcaaaaacccattcctcacaaactatgagcatcgtaaagaa
ttcaccattggaattcgaacatatgtggaatactttaaaaaatcagaagatataacgtgg
agattcaatttaggtttagaggccgccaaaacagcttcaaacatcgaaaacagggataat
gactacggaacaccaggtaatctacaagcttcagaccgcctaaaagcaatgactgatttt
agttatgcacatttaaatgtggatatctttcagaaactgttgctggaattatcggtcagt
ggaaactggtaccaatacaaatatgagcgtagagctccggttgctgacgctcaaaaaact
aaaaattttgacttgcagtttatgccaagagcagcactctcctatttgctgaacaaagag
ctgtcgttgcgcggatctgttagccgtggatattcaccacccacccttgccgaaatcaga
gcctcggacaatgtgatcaatgttgacttacagccagagagcggatggaattatgaaaca
ggaatcagatacgagatagaaaaccgcaggctatccctcgatctcaatagcttttactac
cagttaaaaaatgctatagtccggagattaaatgaaaacgggacagagtttttcatcaat
gcaggtggaacaaaacaatggggactggaagccgcagcctcggtatggctgattctgcca
aataaaaatactacaataagaggactatcaattaaaagtgcctatacgcttagccgtttt
aaattcgatcattacctggatcgtacagtagatctgtccgggaaagatcttaccggtgtg
ccaaaaaatgttatcgttacctcgatagacctgcaattaccaaaaggattttattttttc
cttcagcacaactatacttcaagaattccgcttactgatgccaataccgtttatgccaga
gcctatcacctggtacaaagtaaaatcgggtggaaagaactgcatatcgcaaatacccgg
gtagaaatctttgccggagcagaaaacctgctcaatcaaaactacagtcctggcaatgac
ctgaatgctgccggaggacggtacttcaatcctgccgctacaagaagtttctatgccgga
ctaaatattcatttctaa
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