Pedobacter sp. WC2423: AB3G38_20015
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Entry
AB3G38_20015 CDS
T10715
Name
(GenBank) isocitrate dehydrogenase (NADP(+))
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo00020
Citrate cycle (TCA cycle)
pedo00480
Glutathione metabolism
pedo00720
Other carbon fixation pathways
pedo01100
Metabolic pathways
pedo01110
Biosynthesis of secondary metabolites
pedo01120
Microbial metabolism in diverse environments
pedo01200
Carbon metabolism
pedo01210
2-Oxocarboxylic acid metabolism
pedo01230
Biosynthesis of amino acids
pedo04146
Peroxisome
Module
pedo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pedo_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AB3G38_20015
09102 Energy metabolism
00720 Other carbon fixation pathways
AB3G38_20015
09106 Metabolism of other amino acids
00480 Glutathione metabolism
AB3G38_20015
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AB3G38_20015
Enzymes [BR:
pedo01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
AB3G38_20015
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Iso_dh
DUF2543
Motif
Other DBs
NCBI-ProteinID:
XDC10221
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Position
complement(4799339..4800574)
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AA seq
411 aa
AA seq
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MSVQKIKVDQPVVELDGDEMTRIIWKFIKDKLILPYLDLDIKYYDLGIEYRDETNDQVTI
DSAEAIKKYGVGIKCATITPDEDRVKEFNLKQMWKSPNGTIRNILDGTVFREPIVMSNVP
RLVPNWTAPICIGRHAFGDQYRATDLVTKGKGKLTLTFTPEDGGEVQSFDVYNFQGDGVA
LAMYNTDESIRGFAHACFNQALIKKWPLYLSTKNTILKKYDGRFKDIFQEIYENDFLAKF
KEAGITYEHRLIDDMVASALKWNGNFVWACKNYDGDVQSDTVAQGFGSLGLMTSVLVTPD
GKTMEAEAAHGTVTRHYRDHQAGKPTSTNPIASIFAWTRGLEFRGVLDNNQPLINFCHAL
EQVCIETVESGKMTKDLAVCIHGNKVEHGKHYLYTEEFLAAIDENLQSKLA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtacaaaaaattaaagtagaccagccagttgtagagttagatggtgatgagatg
acccgtatcatctggaaattcattaaggataaactgattttaccttatcttgatcttgat
attaaatattatgatcttggtatagaataccgtgatgagacaaacgatcaggtaactatt
gattcagctgaagccattaaaaaatacggtgtaggtattaaatgtgctaccattactcct
gatgaagaccgcgtaaaagaatttaatttaaaacaaatgtggaaatcaccaaacggaacc
atccgtaatatcttagatggtactgttttccgtgagccaattgtaatgagcaatgttcct
cgtttagtaccaaactggactgcaccgatctgtatcggccgtcatgcttttggtgaccag
taccgtgctactgatttagtaactaaaggtaaaggtaaattaacgctgacattcactccg
gaagatggtggtgaggttcagtcatttgatgtatacaacttccagggcgatggtgttgcc
ttagccatgtataacactgatgagagtatccgtggttttgcacatgcttgtttcaaccag
gcattaatcaaaaaatggcctttatacctttctacaaaaaacactattcttaaaaaatac
gatggtcgtttcaaagatatcttccaggagatttatgaaaatgacttcttagctaaattt
aaagaagcaggtattacttatgagcaccgtttgatcgatgacatggtagcttctgccttg
aaatggaatggtaactttgtttgggcttgtaaaaactatgacggagatgttcaatctgat
acagttgcacaaggatttggttcattaggtttaatgacttcagtattagttactccagat
ggaaaaactatggaagctgaagcagcgcatggtacagtgactcgtcactaccgtgatcac
caggctggtaaaccaacttctacaaatcctattgcttctatctttgcatggacaagagga
ttggaattccgtggagtattagataataaccaaccattaattaacttctgtcacgcttta
gagcaggtttgtattgaaactgttgaaagtggtaaaatgactaaagatttagctgtttgt
atccatggtaacaaagtagaacatggtaaacactacttatatactgaagaattcttagct
gcaattgatgagaacttacaatctaaactagcttaa
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