Pedobacter sp. WC2423: AB3G38_20840
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Entry
AB3G38_20840 CDS
T10715
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
pedo Pedobacter sp. WC2423
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pedo03029
]
AB3G38_20840 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pedo02000
]
AB3G38_20840 (bamA)
Mitochondrial biogenesis [BR:
pedo03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
AB3G38_20840 (bamA)
Transporters [BR:
pedo02000
]
Other transporters
Pores ion channels [TC:
1
]
AB3G38_20840 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
Motif
Other DBs
NCBI-ProteinID:
XDC10377
LinkDB
All DBs
Position
4978834..4981392
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AA seq
852 aa
AA seq
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MKRIYQLILLLLIGSPAMAQIARPKSNPNAPSLKVSGTDMDYFQPKEYTIGGTTLSGAKF
IDKEVIITLSKLIKGEKILLPGEATSNAIKTLWAQGLFDDIELDITKMVLDTVYFDIKVV
ERPRLSSFELNGLSKSQKTDITEKLNSKSGKTIINENTYNSTTGIINKYLAEKGYFFTKV
DYKTKPDPNMENGVVLQVFVDKGNKVKVHEINFTGNKDFKASTLRKYLKKTKQQAFYKVF
GSGKFSKEKYKEDKEKLIAKMQEKGYRDAVIIKDTTYLYNKKSVGVKIDLYEGPKYYVGN
ITWSGNAKYATKDLNKVLGIEKGEVFSEEKLNTKLHGNGAESDDVSSIYLNDGYLTFNVE
PVQTKIYNDTVDLEVRIYEGPQYTNNRITVKGNTITNDRVVLREVRTRPGDKFSKDLLVR
TVRDLGQLGNFDESKTVPTPKPNPSDGTVDIEYAVEEKPSDQVELSGGFGGGRIIGTIGL
TFNNFSLRNILNPKAYKPLPKGDGQKLSLRGQTNGKYYQSYSFSFSEPWLGGKKPVSFGL
SAFTSLSSNGVDVGQTAQRIRLNGVTVSLGRRLKWPDNYFQISHAINMQQYILNNYPGYL
FSTGTSYNLNLTQEISRDSRNSPIFPTEGSYFKFTIQATPPYSLLNKTNYATASDKQRYK
FTEYHKWKFEGQWFQRVIGKMVLKGQAQFGFLGSYNNAVGQSPFERFKLGGDGMQGFDFL
QGSEIITMRGYANSAVTPATATTSGQIQTATNSGSPIYTKYVMELRYPVIASQQATAYLV
GFAEGGNTWNKFSDYNPFNVRRSAGIGARIFLPIFGMLGIDYGFPFDNIPGQANGGKQNF
TFSIAQQLGGFN
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatataccaactcatattattgctattgatcggctcaccggcaatggcacaa
attgcccgtccaaaatctaatcctaatgcccccagcttaaaagtcagcggtacggatatg
gattattttcagcctaaagaatatacgatagggggaactactttaagtggcgccaagttt
attgataaggaagttattattacactttccaaattaattaaaggtgaaaaaatattactt
ccaggggaggcaacctccaacgcaattaaaacactatgggcacagggattgtttgatgat
attgaacttgatatcactaagatggttctggataccgtttatttcgatattaaagtagtt
gaaagaccgcgtttaagttcttttgagctgaacggtctgagcaaatctcagaaaacggat
attaccgagaaattgaattccaaatcaggaaagacgattatcaacgaaaatacttacaac
agtacaacgggaatcatcaataaatacctggctgaaaaaggttatttttttacgaaagta
gactataaaaccaagcctgatccgaacatggagaatggggtggttttgcaggtttttgta
gataaaggaaacaaggttaaagttcatgagatcaattttaccggtaacaaggacttcaag
gcttctactttacgcaagtatttgaagaagaccaagcaacaggctttctataaagtattc
ggctctggtaaattcagtaaggagaaatataaagaggataaagaaaagctgattgctaaa
atgcaggaaaaaggttaccgtgatgcggtgatcatcaaggataccacttacctgtacaat
aaaaaatctgttggtgttaagatcgatttatacgaaggtccgaaatattatgttggaaat
attacctggtcgggaaatgcaaaatatgcaaccaaagatcttaataaagtattgggtatt
gagaaaggtgaagttttcagtgaagagaagttaaatactaaacttcacggtaatggtgca
gagagtgatgacgtatcgagcatttatctgaatgatggttacctgactttcaatgtggag
cctgttcagacaaaaatatataatgatactgttgatttggaagtaaggatttatgaaggc
cctcagtataccaacaacaggattactgtaaaaggaaatacgattacaaatgacagggta
gttttacgtgaggtacgtacaagaccaggtgataagttctctaaagatttactggtacgt
acagtacgtgaccttggtcagctgggtaactttgatgagtctaaaacggtacctactcca
aaaccaaatccttcggatggtacggttgatattgaatacgctgtagaagagaaaccttct
gatcaggtagaattatctggtggtttcggtggtggccgtatcattggtacgattggttta
actttcaataacttctctttaagaaatatattaaatccaaaagcttacaagcctcttcca
aaaggtgatggccagaagctgagtcttcgtggtcagacaaatggtaaatactaccagtct
tacagtttctctttctctgagccatggttaggtggaaagaagccagtcagtttcggttta
agtgcatttacgtcactttcttcgaatggtgttgatgttgggcagactgcacagcgtatc
cgcttaaacggtgtaactgtaagtttaggaagaagactgaaatggcctgataactatttc
cagatttcacatgcgatcaatatgcagcagtatatcctgaataactatcctggttatttg
ttcagcacgggaacgtcttataacctgaacttaacacaggagattagcagggattcaaga
aattcaccaatcttccctactgaaggttcttatttcaaatttactatacaggcaactcct
ccttattcgttattgaacaaaactaactatgcaactgcatcagataagcaacgctataaa
tttaccgaataccacaaatggaaatttgagggtcagtggttccagagggtaattggtaaa
atggttcttaaagggcaggctcagtttggtttcttaggttcttataacaatgcggttggc
cagtctccatttgagagatttaagctgggtggtgatggtatgcagggatttgatttcctt
cagggatctgagatcattaccatgcgtggttatgcgaatagtgcagtaactcctgcaact
gcaacaaccagcggacagattcagactgcaacaaattcaggaagtccgatctatactaaa
tatgttatggaattaagatatcctgttattgcaagtcagcaggcaactgcgtatcttgtg
ggctttgctgagggtggtaatacctggaacaagttttcagattataatccttttaatgtg
agaaggtctgcgggtattggagccagaatatttttaccgatatttggtatgctgggtatt
gattacggatttccgtttgataacattcctggtcaggctaatggtggtaaacagaacttc
acttttagtattgctcagcaattgggtggatttaattaa
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