Pedobacter sp. WC2423: AB3G38_21200
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Entry
AB3G38_21200 CDS
T10715
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
AB3G38_21200 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pedo03011
]
AB3G38_21200 (rpsA)
Ribosome [BR:
pedo03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
AB3G38_21200 (rpsA)
Bacteria
AB3G38_21200 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
S1_2
Spt6_S1
PCB_OB
Rrp44_S1
DUF4752
SH3_2
Motif
Other DBs
NCBI-ProteinID:
XDC10444
LinkDB
All DBs
Position
complement(5070517..5072451)
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AA seq
644 aa
AA seq
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MAKKQVAEKELEAKKAELQGADARLTEKETIESEADSLSIEQIKSSLATPDQDFDWDADD
KAFGKYSDEDRKKFEDMYTDTFNQINQGEIISGIVVSINNKDVVLNVGFKSDGLVSTSEF
RDTPDLKIGDTVDVFVEAPEDANGQLILSRKRAKTQRSWESINEALDNDRIINGFVKSRT
KGGLIVDIMGVEAFLPGSQIDIKPIRDYDVYVGKTMEFKVVKINHEFKNVVVSHKILIED
DLESQKVEIVSKLEKGQVLEGTVKNITDFGVFIDLGGVDGLLHITDISWGRIEHPKEVLS
LDEKINVVVLDFDDEKKRIALGLKQLTPHPWESLDTNLVVGSKVKGKIVTVADYGAFLEI
IPGVEGLIHVSEMSWSQNLRSPQEFLKVSDEIEAEVLTLDRDERKMSLGIKQLTQDPWQN
VAERYPIGSKHTAVVKNMTNFGVFVEIEEGIDGLIHISDLSWSKKVNHPNEFTKVGDTLD
VVVLELDVDSRKLSLGHKQLEENPWDTFETIFTLDSIHQGTVVKVTDKGAVIALPYGVEG
FVPTKHMAKEDGTTIKAEETNDFKIIEFNKDAKRIVVSHARIWEEAKAEVAAEERATKKK
DAKASSNAVKKVKDSVEKSTLGDLGVLAQLKEQMEGEESKNKAK
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaacaagtagcagaaaaagaattagaggctaaaaaagccgaattacaaggt
gcagacgctcgtctgactgaaaaagaaaccattgaatctgaagcagattcattgtcgatc
gaacagatcaaatcatcactagcaacaccagatcaggactttgactgggatgcagacgat
aaagctttcggaaaatactcggacgaagaccgtaaaaagtttgaagacatgtataccgat
actttcaatcaaatcaatcagggtgaaattatcagcggtattgttgtatctatcaacaat
aaagacgttgtattaaacgtaggatttaaatctgacggtttagtatcaacttctgaattc
cgtgatacacctgatttgaaaatcggtgacacagttgatgtatttgttgaagctccggaa
gacgcaaatggtcaattgattttatctcgtaaaagagctaaaacccagagatcttgggaa
tctatcaacgaagcccttgacaatgacagaatcatcaacggatttgttaaaagccgtact
aaaggtggtcttatcgttgacatcatgggtgttgaagctttcttacctggttctcagatc
gacatcaaaccgatccgtgattacgatgtttatgtaggtaaaacaatggaattcaaagtt
gtgaaaatcaaccacgaatttaaaaacgttgtagtatcacacaaaatcttaatcgaagac
gatttagaaagtcaaaaagttgagatcgtatctaaacttgaaaaaggtcaggtattagaa
ggtactgttaaaaacattactgacttcggtgtattcatcgatttaggtggtgttgacggt
ttacttcacattactgatatttcatggggccgcatagagcatccaaaagaagtattgagc
ttagatgagaaaatcaacgttgttgttcttgactttgatgacgagaaaaaacgtatcgca
ttaggcttaaaacaattaactccacacccttgggaaagtttagatactaaccttgttgtt
ggatctaaagttaaaggtaaaatcgttactgtagctgattacggtgcattcttagaaatc
attcctggcgttgaaggtttaattcacgtttcagaaatgtcatggtctcaaaacttacgc
agcccacaggaattcttgaaagttagcgatgaaatcgaagctgaagtattaactttagac
agagacgaacgcaaaatgagcttaggtattaagcaattaactcaggatccatggcaaaat
gttgctgaaagatatcctatcggaagcaaacatactgctgtagttaaaaacatgactaac
ttcggtgtattcgtggaaattgaagaaggtattgatggattaatccatatctctgatctt
tcatggtctaaaaaagttaaccaccctaacgaattcactaaagttggtgatacattagac
gtagttgttttagaattagacgttgatagccgtaaattaagcttaggtcataaacaatta
gaagaaaacccttgggatacttttgaaactatcttcacgttagattcaattcaccaggga
actgttgttaaagtaactgataaaggtgctgttattgctttaccatatggtgtagaagga
ttcgttccaactaaacacatggctaaagaagatggtactactatcaaagctgaagaaacc
aatgacttcaaaatcattgagtttaacaaagatgctaaacgtatcgttgtttctcacgcc
cgtatctgggaagaggctaaagctgaagttgctgctgaagaaagagctactaagaaaaaa
gatgctaaagcttcaagcaatgcagttaaaaaagttaaagattcagttgagaaatcaact
cttggtgatctaggtgttcttgcacaattgaaagagcaaatggaaggcgaagaaagcaaa
aacaaagctaaataa
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