Pedobacter sp. WC2423: AB3G38_22460
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Entry
AB3G38_22460 CDS
T10715
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo03420
Nucleotide excision repair
pedo03430
Mismatch repair
Brite
Enzymes [BR:
pedo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB3G38_22460
DNA repair and recombination proteins [BR:
pedo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB3G38_22460
MMR (mismatch excision repair)
Other MMR factors
AB3G38_22460
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XDC10691
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Position
complement(5342544..5344850)
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AA seq
768 aa
AA seq
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MDYLAGLNPQQRAAVENTKGPAMIVAGAGSGKTRVITYRVAHLIEKGVDAFNILVLTFTN
KASKDMRERISKVVGTEAKNLWMGTFHSVFAKILRVEAEKIGYPSNFTIYDTDDSKSLIR
SILREMQLDDKLYNANFVYNRISSAKNNLVSHIEYMKSAEIQAEDISNKRPLIGSIYETY
TKRCFKAGAMDFDDLLFKTNVLLKDHPDVLNKYQQKFKYLMVDEYQDTNFSQYTIVKKLA
AAYQNICVVGDDAQSIYGFRGANIQNILNFEKDYPDLKVYKLEQNYRSTQNIVDVANSII
ANNKNQLEKNVFSENESGDRIKVSRAFTDNEEGKIVAEAIVQDRTSKGLNYSDFAILYRT
NAQSRAMEEGLRKLNIPYKIFGGLSFYQRKEIKDLIAYFRLTFNPSDEEAIKRVINYPKR
GLGDTTVDKIIVAADQHNITMWQVVCEPQTYIAGRIANQLNDFSVLIQSFQAEAKKLDAY
ETALYIAQHSGILKELHTDDSVEGRSRYENIQELLNGIKEFAEREDIEDRSLAIFMQDIA
LLTNDDRQDDKEKDTVSMMTIHSAKGLEFKNVFVVGLEENLFPSQMSLNSRTDLEEERRL
FYVAITRAEKKLTLTYATSRYRWGTLTNCEPSRFISEISARFLELEVVKAPKTSLSSDSF
DGERRSWTQQRDSFSKPKPASSGSATQTAPARPKTSTILPTAHIPTPGFTADAASAFQNG
MEVEHEKFGFGKIINLEGTLPDVKATVFFQGLGNKQLLLKFAKLRIVK
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
ttggattatttagcaggattaaaccctcagcaacgtgcagcagtagagaatactaaagga
ccggcaatgattgtcgctggtgcgggatcaggtaaaacaagggtaattacatacagagtc
gcacatcttattgaaaaaggtgtggatgcttttaatattttagtattgacctttacaaac
aaagcttcgaaagatatgcgtgagcgtatctcaaaagttgtgggtacagaagcaaaaaac
ttatggatgggaacattccactctgtttttgccaaaatactacgtgttgaagcagaaaag
ataggttatccttctaatttcactatctatgatacagatgatagtaaaagtctgatcaga
tctattctgcgtgaaatgcaattagatgataaattatataatgcgaacttcgtatataac
cggatatcttctgcaaaaaacaacctggtcagccatatagaatatatgaaaagtgccgaa
attcaggcggaggacattagcaataaacgtcctttaatcggctctatctatgaaacttat
actaaacgctgctttaaagcaggcgcaatggattttgatgatttacttttcaaaaccaat
gtattgttaaaagatcatcctgatgtattgaataaatatcagcagaagtttaaatacctg
atggtcgatgagtaccaggatactaacttttcacaatataccattgtaaaaaaactggca
gccgcttatcagaatatctgtgtagtaggtgatgatgcgcaaagtatttatggtttccgt
ggtgctaatattcagaatatcctgaattttgaaaaggattacccggatttaaaagtttat
aaattagagcagaattaccgctctacccaaaatattgttgatgtcgccaatagtatcatt
gcgaacaacaaaaatcagctggagaaaaacgtattttctgaaaatgaatctggtgacaga
atcaaagtatcaagagcatttactgataatgaagaaggtaaaatagttgccgaagctatc
gttcaggacagaacatcaaaaggcttaaattatagtgatttcgccattctttaccgtacc
aatgcccagtcaagagcaatggaggaaggtttgagaaaactcaacatcccttataaaatt
ttcggaggactatctttctatcagcgtaaagagattaaagatttaattgcttacttccgt
cttactttcaatccaagtgacgaagaagctatcaaaagagtgatcaactatccaaaaaga
ggattaggtgatactacagttgataaaattatagtagctgctgatcagcataacataaca
atgtggcaggtagtctgcgagccgcaaacttatattgccggccggattgcgaaccagctg
aatgatttttctgtactgattcagagttttcaggccgaagccaagaagctggacgcttat
gaaactgcattatatatcgcacaacattccggtatcctgaaagaactgcatactgatgac
agtgtagaaggccgcagcaggtacgaaaacattcaggaattactgaatggtatcaaagaa
tttgctgaacgtgaagatattgaagacagaagccttgctattttcatgcaggacattgcg
ctgttaacgaatgatgaccgtcaggatgataaagaaaaagataccgtttcgatgatgacc
attcactcggcaaaaggactggaattcaagaacgtttttgtggtagggctggaagagaat
ctgtttccttctcaaatgtcgctcaattcaagaactgatctggaagaagaacgccgttta
ttctatgtcgccattacccgtgcagagaagaaactgaccctgacttatgccacttcacgt
taccgctggggaacgctgaccaattgtgagccaagccgttttatcagtgagatcagtgca
aggttcctggaactggaagtagttaaagcacccaaaacaagtttatcgtctgatagcttt
gacggggaacgcaggtcatggacacagcaaagagattctttcagcaaacctaaaccagca
agctcaggctcagctactcagaccgctcctgcaagaccaaaaaccagtacgattctgcct
actgcgcacatccctacacctggttttactgctgatgcagccagtgcatttcagaacggt
atggaagtggaacatgagaagtttggattcggtaaaattatcaatctggaaggtacttta
ccggacgtaaaagcgacggtatttttccagggattaggaaacaagcaattgttattaaaa
tttgctaaattgcggattgtaaaataa
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