Pedobacter sp. WC2423: AB3G38_22610
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Entry
AB3G38_22610 CDS
T10715
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pedo Pedobacter sp. WC2423
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pedo03110
]
AB3G38_22610 (clpB)
Chaperones and folding catalysts [BR:
pedo03110
]
Heat shock proteins
HSP100
AB3G38_22610 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
Sigma54_activat
AAA_22
nSTAND3
IstB_IS21
Mg_chelatase
AAA_18
NACHT
AAA_14
RuvB_N
TniB
ATPase_2
AAA_7
AAA_24
Zeta_toxin
Torsin
ResIII
AAA_3
AAA_25
T2SSE
NBD_SMAX1
AAA_28
DNA_pol3_delta2
DUF99
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
XDC10720
LinkDB
All DBs
Position
complement(5375152..5377764)
Genome browser
AA seq
870 aa
AA seq
DB search
MNFNNFTIKAQEAVQQASEIAQGNQQQAIETAHLLKGLLTVDENVVSYVLKKLNVNLNTL
NINLDEQIAKFPKVSGSNGYLSSGANSALQKAQTYLKEFKDEFVSVEHLLLGILSVNDHT
SKLLKDQGVTEKDLKKAIAALRGDNRVTDQNAEATYNALNKYARNLNEYAESGKLDPVIG
RDEEIRRVIQILSRRTKNNPILIGEPGVGKTAIAEGIAFRIIKGDVPENLKTKTVYSLDM
GSLIAGAKYKGEFEERLKAVVKEVTQSEGDIILFIDEIHTLVGAGGGEGAMDAANILKPA
LARGELRAIGATTLNEYQKYLEKDKALERRFQKVVVDEPDTQDAISILRGLKERYETHHK
VRIRDEAIIAAVELSQRYISDRFLPDKAIDLMDEAASKLRLEMDSVPENVDELDRKIMQL
EIEREAIRRENDDKKVKSLGEEIANLSAERDELKAKWQGEKDVVDGINTELEQIENYKLE
ADQAERAGDYGKVAEIRYGKIKEAQDKVEQLKVVLESQQGEGRMLKEEVTADDIAGVVAR
WTGIPVTKLVSSEREKLLNLEHELHKRVAGQDEAIEAISDAIRRSRAGLQDKRKPIGSFI
FLGTTGVGKTELAKALAEFLFNDDNALTRIDMSEYQERHSVSRLIGAPPGYVGYDEGGQL
TEAVRRKPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDNKGRLVNFKNTIIIMTSNIGS
HLIQENFKDLDDANRDEVIAKTKNELFELLKQTIRPEFLNRIDELIMFTPLNRSEVRNIA
ELQFRHVQDTLAEMGVEIEATPEALDWLAELGYDPQFGARPLKRVIQKRVLNELSKEILA
GKIDKDSKIKLDMFDHKFVFLNNKKETPVS
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcaacaactttactataaaagcacaggaagcagttcaacaggcttccgaaata
gcccagggcaatcagcaacaggctattgaaacggcccatttgctaaaagggttgcttact
gttgatgaaaatgtagtttcttatgttttaaagaagctaaatgttaatttaaatacgctc
aacataaatctggatgagcagattgcaaaattccccaaagtaagcggcagcaatggatac
ttatcttcgggtgcaaattcagcgctgcaaaaagcgcagacttacctgaaagaatttaaa
gatgaatttgtctctgtagaacatcttttactgggcatcttatcggtgaatgatcatacc
tccaagcttttaaaagatcagggtgtaactgaaaaagatctcaaaaaagcgattgctgct
ttgcgtggtgacaacagggttactgatcagaatgctgaagcaacctataatgctttaaac
aaatacgcgaggaacttaaatgaatatgcagaatccggaaaactggatcccgtaattggc
cgtgacgaagaaattcgccgtgtgattcagatcctttccagaagaactaagaataacccg
attttaatcggtgaacccggtgtaggtaaaactgccatcgcagaaggtattgccttcagg
attattaaaggtgacgtacctgaaaacctgaagacaaaaacagtgtattccctggatatg
ggttctttaattgctggtgcaaaatataaaggagaatttgaagagcgtctgaaagccgtg
gtcaaagaagtaacacaaagtgaaggtgatatcatcctgtttattgatgaaatacacacg
cttgtaggtgctggtggtggtgaaggtgcaatggacgctgcgaatatcctgaaacctgct
ttagcccgtggtgagttgcgcgcaatcggagcaacaaccttaaacgagtatcagaaatat
ctggaaaaagacaaggcactcgaacgtcgtttccaaaaagtagtcgttgatgaacctgat
acgcaggatgcaatttctattttaaggggattaaaagaaaggtatgaaacacaccataag
gtgagaatccgtgatgaggctattattgctgcagtcgaactttcacagcgctatatcagt
gaccgttttcttccggataaagcgattgacttaatggatgaagctgcttctaaactacgt
ttagaaatggacagtgtgccagaaaatgtagatgagctggaccgtaagattatgcagctg
gaaattgaaagagaagcaatcagaagagaaaatgatgataaaaaagtaaaatctcttgga
gaagaaatcgctaacctgtctgcggaacgtgatgaactgaaagcaaaatggcaaggagag
aaagatgtcgttgacggcattaataccgaactggaacagatagaaaactataaactggaa
gctgatcaggcagaacgtgcgggtgattatggaaaggttgcagaaatccgttatggtaaa
attaaagaggcacaggataaagtagagcagctaaaagtagtattggaaagtcagcagggt
gaaggccgtatgctgaaagaagaagttactgctgatgatattgcaggtgttgtagcccgc
tggacaggaattccggtaacgaaattagtatccagtgagcgcgaaaaattgttaaacctg
gagcacgagctgcacaaacgtgttgctggacaggatgaagctatcgaagccatatctgat
gccatacgccgctcccgtgctggtttgcaggataaacgtaaacctatcggctcttttatt
ttcttaggtacaacgggtgtcggtaaaacagagttagcgaaagcactggcagagttcttg
ttcaatgatgataacgccctgacaagaattgatatgagtgaatatcaggaaaggcattct
gtttccagattaatcggggcgcctccgggatatgtaggttacgatgaaggtggccagctg
actgaagctgttcgccgtaaaccttactcggttgtattgctggatgaaattgaaaaagcg
catccggatgtgtttaacattttactgcaggtacttgatgacggacgtttaacagataat
aaaggaagactggtcaatttcaagaatacgattattatcatgacttctaatattggttct
catttgatacaggagaactttaaggacctggatgatgcaaacagagatgaagtgattgca
aaaaccaagaatgaactgtttgaattactgaaacaaacgatcagaccggagttcctgaac
aggattgatgaattgatcatgttcacgcctttaaaccgtagtgaagtaagaaatatcgca
gaactgcagttcagacatgttcaggatacacttgccgaaatgggtgttgaaattgaagca
acgccagaagcactcgactggctggcagaactcggttatgacccgcagtttggagcccgt
cctttaaaaagagtgatccagaaacgtgtgttaaatgaactatctaaagaaatactggcc
ggaaaaattgataaggacagtaaaataaaactggatatgtttgatcataagtttgtattt
ctgaataataaaaaggaaacacctgtttcttaa
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