Pedobacter sp. WC2423: AB3G38_24410
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Entry
AB3G38_24410 CDS
T10715
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo00061
Fatty acid biosynthesis
pedo00071
Fatty acid degradation
pedo01100
Metabolic pathways
pedo01212
Fatty acid metabolism
pedo02024
Quorum sensing
pedo04146
Peroxisome
Module
pedo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AB3G38_24410
00071 Fatty acid degradation
AB3G38_24410
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AB3G38_24410
09145 Cellular community - prokaryotes
02024 Quorum sensing
AB3G38_24410
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pedo01004
]
AB3G38_24410
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pedo04147
]
AB3G38_24410
Enzymes [BR:
pedo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AB3G38_24410
Lipid biosynthesis proteins [BR:
pedo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AB3G38_24410
Exosome [BR:
pedo04147
]
Exosomal proteins
Exosomal proteins of breast milk
AB3G38_24410
Exosomal proteins of breast cancer cells
AB3G38_24410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
XDC11070
LinkDB
All DBs
Position
complement(5792930..5794843)
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AA seq
637 aa
AA seq
DB search
MVSFNEFSTVPGLLRNVVENIHKPEETFLIHKKNNEWEQISFKHTLDTADAVAAFFLSKD
AVKGDRMGLMIENGPDYVYYDQGIQQIGAINVSIYPTLSEQEVEYIINDSGIKSILIGNP
FLYKKILKIADNCRNLQYIIPAFAEYTKTTVPEGLNKTIISFEELIRQGKELVSTYQVKI
KAARATVRPSDTSSLIYTSGTTGTPKGVMLSHSNFVENVKVCLQQIPIIDETDVFLSFLP
LSHVFERTATYHVCCAQGCKIAYAQSLELLAKNMAEIKPTVMSCVPRLLERIHDKAIKSG
TAEGGLKAKIFLWALETGQNYRYKIEAGKTPGLVLAVEKRIAEKLVFSKIKEKTGGRLKF
MISGGAALPKNVGEFFGNLGIKILEGFGLTETSPVMSVTEYDRQVYGTVGRIIPGIEVAI
QHIETKEMISIQTHESFAADFECAEGEIIVRGHCVMQGYFNKPAETAEAIDKNNWFHTGD
IGRFYKGNLQITDRLKNMIVNAYGKNVYPTPVENIYLKSLKIDSLFLIGDKREYLTAIII
PNRESLQEKFNLPDAYFLQPDTFINEPEIIDWIGQDIRKLSNELSKFERIKNFRIKRNPF
SIEEGEITPTMKIKRKVVEKIYAEAINELYTEAVDAD
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggtatcattcaatgagttttctacggttcccggcttattaagaaacgtagtagaaaat
attcacaagcctgaagaaacattcttaattcataaaaagaataatgaatgggagcagatc
tcatttaagcatactttggacacagccgatgcggtagctgcattttttttatcaaaagac
gcagttaaaggtgacagaatgggactcatgattgagaatggtcccgattatgtatattat
gaccagggaattcagcaaattggtgctattaatgtatctatttaccctaccctctccgaa
caggaagtcgaatatatcattaatgactccggaataaaatccatcctgattggtaatcca
tttctttataaaaagatattgaagatcgcagacaattgcagaaatcttcaatacatcatt
cctgcttttgcggaatatactaaaacgactgttcccgaaggcctgaataaaactattatc
agttttgaagaactgatcaggcaaggtaaagaactcgtttctacctaccaggttaaaatc
aaagcagcaagggctactgtccgtccttcagacacttcttccttaatctatacttcaggt
acaaccggtacaccaaagggcgttatgctttctcacagcaatttcgtggagaatgtaaaa
gtttgtttgcagcagatcccgattattgacgaaacagacgtattcttatcgtttcttcct
ttatcccatgtttttgaaagaacagcaacctatcatgtatgctgcgcacaaggctgtaaa
attgcctatgcacaaagtctggaattactggcaaaaaacatggccgaaattaaaccaacg
gtgatgagctgtgtaccccggttattagagcgtatccatgataaagccatcaaaagcggt
acagctgaaggtggtctgaaagctaaaatattcttatgggcactggaaacaggacaaaac
taccgttacaaaattgaagctggtaaaacaccaggtttagtacttgctgtagaaaagaga
attgcggagaaactggtattcagcaaaataaaggagaaaaccggtggaagattaaaattt
atgatttccggtggcgcagcacttcctaaaaatgtaggtgaatttttcggtaatctgggc
attaaaatactcgaaggctttggcttgactgaaacctctccggtgatgtcggttacagaa
tatgacagacaggtttatggaaccgtaggcaggattatcccgggcatagaggtcgctatc
cagcacattgagactaaagaaatgatcagcatacagacccatgaatcttttgcagcagat
tttgagtgtgcagaaggtgaaattatagttcgcgggcattgtgtaatgcagggttatttt
aataaaccggcagaaactgctgaagcaattgataaaaacaactggttccatacgggcgac
attggccgtttctataaagggaatcttcagattactgaccgtttaaaaaatatgattgtc
aatgcttacggaaagaacgtttatcctaccccggtagaaaacatctatctgaaaagcctt
aaaatagattccctgtttttaattggtgacaaaagagaatatctgaccgcgattattatc
ccgaacagagaaagcttgcaggaaaaattcaacctgccggacgcttactttctacaaccc
gatacttttatcaatgaaccagaaattatagactggatcggacaggatatcaggaaatta
tcaaatgagttatctaagtttgagcggatcaagaacttcaggattaaaagaaacccattc
agcattgaagaaggtgagatcacgcctaccatgaaaataaagcgtaaagtggtcgaaaaa
atctacgctgaagcgatcaatgagctctatacagaagccgttgatgccgattaa
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