Phycodurus eques (leafy seadragon): 133395547
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Entry
133395547 CDS
T09682
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133395547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pee03019
]
133395547
Messenger RNA biogenesis [BR:
pee03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133395547
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
133395547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
133395547
NCBI-ProteinID:
XP_061520534
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Position
20:complement(3495769..3508579)
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AA seq
888 aa
AA seq
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MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGMWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKKFIEKHRFHI
RMLETILRMLDNDSVQVDSIRKIKDDVEYYLDSSQDPDFEENEFLYDDLDLEDIPASLVA
TSPPGQSHLEDEIFQHSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQSP
VKNGNPSSSSLSSSSSSSSSSSCSSSAPTSSSLVSMATIASGGLANLSAGSYSNATQQPP
SQAQHHKQAKASISFSTSGASAAHPANSHPAPAPAASSPPSSNALGFFASSSQSPAPSRP
SPACGSLGRGLSLGNNATSASSMSAGLGLSGMPASLSTTTGLLSSSTPAPYAQAAGSGPA
GSGRPGSQGSSVAVGGPTSSAGGLLGSVSGPGILGLTSGPSGLQGSSVVAQSQVGVIGVI
GSNDGGGGGSGSARGAGLSAGPPGRQKQNGPSSECLMFDNVGELLQGYSAALADSARDSS
PNSASQSQSCQSLSLTSTAKQLKDSAPTLLASVTSSSGSLSASSYGEVKMVNSGGVLFNG
PPSYATPSDGTKEPLSSLNSAAERAALGSAVDGDVTSLHLNTELFPSTPPSSSGAPSSSQ
SCLSEVSIPPSLGVCPLGSLPLSKEQLYQRALEEAVWSHMPHPSDSERIRQYLMRNPCPT
LPFHHQVPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMW
FQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaaggaaactacaaggtgaaatagatcgatgtctgaagaaagtagcggaa
ggagtggagcagtttgaagacatctggcaaaaacttcacaatgcagccaacgccaaccag
aaggagaagtatgaagccgaccttaagaaagaaatcaagaagctgcagcgccttcgggac
cagatcaagacgtgggtggcgtccaatgagatcaaagacaagcggcagctggtggagaac
cgcaaactcatagaaacgcaaatggagcgtttcaagatcgtggagcgagagaccaagacg
aaagcgtactccaaagagggtctgggtctggcccagaaagtggacccggctcagaaggag
aaggaggaggtcggcatgtggttgacgaacacgatagacacgctcaacatgcaggtggac
cagtttgagagcgaggtggagtctctgtcggtccagaccaggaaaaagaaaggagacaag
gagaagcaggaccgcatcgaggagttgaagaagttcatcgagaagcaccgctttcacatc
cggatgctggagaccatcctgaggatgttggacaacgactcggtgcaggtggactccatc
aggaagatcaaggatgacgtggagtactacctggactcatcgcaggatccggactttgag
gagaacgagtttctgtacgacgacctcgatctggaggacattcctgcgtcgctggtggcc
acctccccgccaggacagtctcacttggaggacgagatcttccaacactccagcagcacg
cccacgtccaccacctcatcctcgcccatccctccctcgcccgccaactgcactacggag
aactctgaagacgacaagaagcgaggtcgctcaactgacagtgaagtcagtcagtctcct
gtgaagaatggcaacccctcctcctcctcgttatcctcgtcgtcatcctcctcgtcttcc
tcctcttgttcgtcttcggcgccgacttcttcctccttggtctccatggcgaccatagct
agcggcggcctcgccaacctgtcggccggcagctacagcaacgccacccagcagccgccc
tcccaggcgcagcatcataagcaggccaaagcctccattagcttctcgacctccggggcg
tccgccgcgcatcctgccaacagccaccccgcacccgcccccgccgcctcgtcgcccccc
agcagcaatgctctgggctttttcgcgtccagctcgcagtcgcccgcgccctcccggccc
tcgcccgcctgcggcagcctgggccggggtctgtcgctagggaataacgccacctctgct
agcagcatgtcggccggactcggcctttcggggatgccggcgtccctgagcaccacgacg
ggccttctgtccagctccaccccggcgccgtacgcccaggccgccggctcgggcccggcg
ggctccggccggccgggctcccaggggtcgtcggttgcggtcggcgggcccacgtcctcc
gcaggcggtctgctgggttcggtgtcgggccctgggattttgggtctgacgtccggcccg
tcgggactgcaggggtcctccgtggtggcgcagagtcaagtgggagtcatcggagtcatc
gggagcaacgacggcggcggcggcggctcgggatccgccaggggcgccgggctctccgcg
ggcccgcccggccgacagaagcaaaacggacccagcagcgagtgtctgatgttcgacaac
gttggcgaactcctgcaaggttacagcgctgcgctagcagacagtgccagagactcctcc
cccaacagtgccagccaatcacaaagctgccaatctttgtcattgacctcaacagccaaa
cagcttaaggactctgctcccaccttactggcctccgtcacgtcgtcgtcgggctcgctg
tcggcgtcgtcctacggcgaggtcaagatggtgaacagcggcggcgtgctgttcaacggg
ccgccgtcgtacgccacgccctcggacggcaccaaggagcccctgagtagcctgaactcc
gcggccgagcgagcggcactcggctcagccgtggacggagacgtgacctctctgcacctc
aacacggagctgttccccagcacgccgccctcgtcgtcgggcgccccgtcgtcttcgcag
tcgtgtttgtcggaggtgagcatcccgccctcgctgggcgtttgccccctggggtccttg
ccgctgtccaaggagcagctgtaccagcgggccttggaggaggccgtgtggagccacatg
ccgcacccgtccgactccgagaggatcaggcagtacctgatgaggaacccgtgccccacg
ctgccgttccaccaccaggtgccgccgccccactcggacacggtggagttctaccagcgg
ctctccacggagacgctcttttttatcttctactacctggagggcaccaaggctcagtac
ctggcggccaaagcgctgaagaagcagtcgtggaggttccacaccaaatacatgatgtgg
ttccagaggcacgaggagcccaaaaccatcacggacgagtttgagcagggaacgtacatt
tattttgactacgagaagtggggccagcgcaagaaggagggtttcaccttcgagtaccgc
tacttggaggaccgcgacctccagtga
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