Phycodurus eques (leafy seadragon): 133395745
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Entry
133395745 CDS
T09682
Name
(RefSeq) collagen alpha-1(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04510
Focal adhesion
pee04512
ECM-receptor interaction
pee04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133395745
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133395745
09142 Cell motility
04820 Cytoskeleton in muscle cells
133395745
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pee00535
]
133395745
Proteoglycans [BR:
pee00535
]
Extracellular matrix (ECM) proteoglycans
Others
133395745
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
133395745
NCBI-ProteinID:
XP_061520882
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Position
20:7331728..7349538
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AA seq
949 aa
AA seq
DB search
MAFCSSALTRKQPSAATLRTPVCVALVSLLLAPALGQLDFNRLDGDTVCPPTRSAQDDLP
GFDLITQFQLDVIPLKGVRKVDGSTPLQVAYRLDREANFQIPTMLNFPRGFPDEYSFMVT
FRMIKNTVSKVWNIWQIVDEDGRKQAGMRLNGDQQSLEYFLTSPDGNLQTVTFPGLSVLF
NTKWHKVMIGVERDRVTLYVDCQPVDQKPIKGKGPINTEGDTLIGRLDSDPEASVVFELQ
WMLIHCDPKRAQRESCNELPATEMFANAEPDRLIQGPPGATGPEGPRGPAGEDGRDGRDG
LPGVPGSPGATGSKGEQGEIGLPGQRGLPGLLGPAGSSPGPMGPRGPVGERGLPGFPGPA
GPPGPASEGPAGPPGKPGIPGDEGNIGPEGAPGPKGDNGNPGLTGLPGPPGPVGPPGASG
EGSGEACPAACPAGPQGLAGLPGMKGHKGMPGENGKDGIPGEKGETGPQGPQGTPGRMGD
DGQRGPIGFTGTTGEKGDRGPPGFNGMPGPTGPPGAPGVEGLRGRQGLEGPKGDEGAIGP
QGEQGIQGEKGDVGAPGKDGMDGIPGVDGAKGEPGPAGTVGVRGVVGIPGLPGKQGVVGP
SGEKGDTGAEGAIGPDGHPGKTGEAGKPGEDGKPGDKGSTGEPGKQGPVGPAGPPGIEGE
KGVKGNTGGKGMKGHTGHKGDQGPMGPEGPKGSLGATGLPGDPGVKGDQGPPGIPGIKGE
HGGKGLRGATGAEGRPGQPGHEGLAGPMGAQGLEGEPGLPGAPGPRGLPGPKVGDDKLRE
MCSAVVEEQLAEFMKDFLKRPAALGAPGIPGLAGPPGPAGADGAPGPPGAQGSMGAKGHP
GYFGIPGAPGKKGDPGAKGDKGDKGEDGVGIKGSAGLPGAPGAQGAPGIGKDGKDGERGE
QGSPGVPGAAGPKGPSGPPGLCDPSTCINRNPPALFMYSGKKSAAYKKK
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggccttctgctcctccgctttgacgagaaagcagccaagcgctgcgacgctgcggacg
cccgtctgcgtggccctcgtctccctccttcttgctcctgctctcggacagctggacttc
aaccgactggatggcgataccgtctgcccacccacgagaagcgcacaggatgatcttcca
ggttttgatttgatcacccaattccagctggatgtcatccccctaaaaggagtgaggaag
gttgatggctcaactcccctccaggtggcctaccgcctcgaccgggaggccaacttccaa
attccaaccatgctcaactttcctcgtggtttccccgatgagtactctttcatggtgacg
ttccgcatgatcaagaacacagtgagcaaggtatggaacatctggcaaatagtggacgag
gacggccgcaaacaagccgggatgaggctcaacggtgaccagcagtctctggagtacttc
ctgacgagcccagatggcaacttacagaccgtcaccttccctggcctgtcggtgctcttc
aacaccaaatggcacaaggtgatgatcggcgtagagcgcgaccgggtcacgctctacgtg
gactgccagcctgtggaccagaagcccatcaagggcaaggggcccattaacacagaggga
gacactcttatcggcaggctggattctgatcctgaggcgtccgtagtgtttgagctccag
tggatgttgattcactgcgacccaaagagagcccagcgagagagctgcaacgagctgcct
gccaccgagatgtttgccaatgctgagccagacaggttaatccaaggcccccctggagcc
accggtcctgagggtcctcgtgggcctgcgggggaagatggccgagatggacgagatggt
cttccgggggttcctggcagcccaggtgcgactggcagcaaaggtgagcagggggaaatt
ggacttcctgggcagcgaggcctacctggtcttctaggaccagctggttcttctcctggc
ccaatgggtcccagggggccagtgggagagagaggtctccctggctttcccgggcctgca
ggtcctcctggcccagcaagtgaaggacccgctggaccgccaggaaagccaggaatacct
ggagatgaaggaaatatcgggcctgagggcgcaccaggacccaaaggggacaatggaaac
ccaggacttacagggcttccaggacctcctggcccagtggggccacctggtgccagcggt
gagggaagtggggaagcttgtcctgcagcctgccctgctggaccccagggattggctggc
ctaccaggcatgaagggacacaaaggtatgcctggtgaaaatggcaaagatggtatccct
ggagaaaagggagagactggaccacaaggtcctcaaggtacgccaggtcggatgggagac
gatggtcaaagaggacccattggatttactggtacaactggggagaaaggagacagaggt
cctccaggtttcaatggcatgcctggacccactggcccacctggagctcctggtgtggag
ggattgcgtggacgtcaaggtttggagggacccaagggggatgaaggagcaattggacct
caaggagagcagggtattcaaggagaaaagggagatgttggagcgccaggcaaagatggc
atggatggaattcctggagttgatggagccaagggagaacctggtccagctggaacagtc
ggggtgaggggggttgtgggtattcctggccttccgggcaagcagggagtagttggaccc
tctggcgaaaagggtgatactggtgctgagggagccattgggccagatggacatccaggc
aaaactggcgaggccggaaaacctggagaagatggaaagccaggagataaagggtcaact
ggtgaacctgggaaacaagggccagtggggcctgcgggtcctccaggcatcgagggtgaa
aagggagtgaaaggcaacactgggggaaaaggaatgaagggtcacacaggacacaagggg
gatcagggaccgatgggaccagaaggaccaaaaggaagtttgggagctacaggtcttcct
ggagatcctggagtcaaaggagaccagggcccacctggtattcctggaattaaaggagag
catggaggaaagggcctgagaggagcaaccggagcagaaggaagaccaggtcagccaggt
cacgagggtttggctggtccaatgggagcccaagggctggagggcgagccaggattaccc
ggagcaccaggccccagaggtctgcctgggccaaaggttggcgatgacaagcttcgggag
atgtgttcggctgttgttgaagaacaattagcagaattcatgaaagacttcctgaagagg
cccgctgccctcggagccccaggcatcccaggactagcgggaccaccgggccctgctgga
gccgacggagcaccaggacccccaggagctcaagggtcgatgggtgccaaaggccatccg
ggctactttgggatcccaggtgcaccgggcaagaaaggtgaccctggagcaaagggagat
aaaggagataagggtgaagatggcgttggaatcaaaggaagcgcagggctaccaggtgca
ccaggtgcccaaggtgcgcctggcattggcaaggatggcaaggacggagaacgtggtgaa
caaggaagccccggtgtcccaggcgcggccggtccaaaaggtccctctggtccaccaggt
ctttgtgacccatcgacctgcataaacagaaatccaccagctctattcatgtacagcggg
aagaagtcagctgcttacaaaaagaaatga
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