Phycodurus eques (leafy seadragon): 133395883
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Entry
133395883 CDS
T09682
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03022
Basal transcription factors
pee03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133395883 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
133395883 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pee03021
]
133395883 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
pee03400
]
133395883 (gtf2h4)
Transcription machinery [BR:
pee03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
133395883 (gtf2h4)
DNA repair and recombination proteins [BR:
pee03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
133395883 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
133395883
NCBI-ProteinID:
XP_061521144
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All DBs
Position
20:complement(14955856..14996936)
Genome browser
AA seq
466 aa
AA seq
DB search
MKLRVQLQCKNLHEYLRELSPEILDRLYNHPATCLAVYRELPSLAKNYVMRMLFLDQPLP
QAAVALWVNKESKKDHDECVSVLAGLRLWHSQQLQGGLQGYILNPVFKDNLRIALLGGGR
AWADEGSSLGPDRHARDIESLDRYAMERWEVILHFMVGSPSAAVSQDLAQLLTQAGLMKS
EAGEAPSITSAGFQFLLLDTASQLWYFTLQYLKTAQSRGMGLVEILSFLFQLSFSTLGRD
YSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAISLAAGVTSSSSSLSSSSNLG
STPGTGDAGFIVVETNYRIYAYTNSELQVSLVALFSEMLYRFPNVVVAQVTRESVQQAIA
NGITAQQIIHFLRTRAHPIMLKQTPVLPPTITDQIRLWELERDRLQFTEGVLYNQFLSQA
DFEVLRDRAQGLDCLVWQDVAHRVMVVTPHGHSEVKRFWKQQKSHT
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgagtccagctgcagtgcaagaatttgcatgaatacctcagagagctgagt
ccagagattttggaccgactctacaatcatccggcaacatgtctcgctgtctacagggag
cttccttctctggccaaaaactatgtgatgcgaatgctgtttctggatcagcctcttccg
caggcagcagtggcattgtgggtgaataaagaaagcaagaaggatcatgatgaatgcgta
tcagtgctggcaggactccgcctttggcacagtcagcagctgcagggtggtctgcaagga
tatatcctgaatccagtgttcaaagacaacctgaggatagcgctgctcggcgggggtcga
gcttgggcagacgaaggcagcagcctgggacccgaccggcatgctcgcgacatagagagt
ctggaccggtatgccatggagcgctgggaggttatcctgcacttcatggtgggttctccc
agtgctgctgtcagtcaggacctggctcaactgctgactcaagcaggcctcatgaaaagt
gaggcaggcgaggccccctccatcacctctgccggcttccagttccttctgctggacaca
gcctcccaattgtggtatttcaccctgcagtacctcaaaactgctcagtcaagagggatg
ggcctggtggaaatattgtcattcttgttccagctcagtttctcaacattgggcagagat
tactcagtggagggcatgagtgagtcattactcacatttctgcagcacctccgggagttt
ggactggtcttccaaaggaagagaaagtcaaggcggtactatcccaccagattggccatt
agtctggctgcgggagtcacgagcagctcttcttccctttcctcctcttctaacttgggc
tccactcctggtactggagatgctggcttcattgtggttgaaacaaattatcgcatctac
gcctacacaaactcagagctccaggtttctctggtagcgctcttcagtgaaatgttgtat
cggtttcctaatgtggtggtggctcaggtcacaagagagtcggtgcagcaggctatcgca
aatggcatcactgcgcagcagatcatccactttctgagaaccagagcacaccctatcatg
ctgaaacagacaccagtgcttcctccaactataacggatcagatacgactttgggagctg
gaaagagatagactgcaattcacggagggagtgctctacaaccagtttctctcccaggct
gactttgaggtgctgcgagacagagctcagggtctggattgtctggtgtggcaagatgtg
gctcacagggtgatggtggtgacaccacacggacacagtgaggtcaagaggttctggaaa
caacagaagtcccacacataa
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