Phycodurus eques (leafy seadragon): 133396077
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Entry
133396077 CDS
T09682
Name
(RefSeq) polyadenylate-binding protein 1A-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03015
mRNA surveillance pathway
pee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133396077
09123 Folding, sorting and degradation
03018 RNA degradation
133396077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pee03019
]
133396077
03041 Spliceosome [BR:
pee03041
]
133396077
Messenger RNA biogenesis [BR:
pee03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
133396077
mRNA cycle factors
Stress granule specific factors
133396077
Spliceosome [BR:
pee03041
]
Complex C
Other components
Complex C specific factors
133396077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_5
SET_assoc
RBD_RDR6
ATP-grasp_2
DUF4283
Motif
Other DBs
NCBI-GeneID:
133396077
NCBI-ProteinID:
XP_061521507
LinkDB
All DBs
Position
20:4033214..4039616
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AA seq
600 aa
AA seq
DB search
MASLYVGDLHVDVTEAMLYERLSRVGVILSIRVCRDMMTGRSLGYACVNFQQLADAEHTL
DTMNFDLIKGQPMRIMWWQRDPTLRESGVGNIFIKNLDRSIDNNVLYDIFSIFGNILSGK
VVCDEHGSKGYGFVHFETQEAAERAIAEMNGELLKDRKVFVGHFKSRKEREAELAVQAKE
FTNVYVKNFGVDVDDNTLREIFKTFGSTTSVRVIMDERGSCRGFGFVSFARHEDAQKAVD
EMNGKELHGRMIYVSRAQKKVERQAELKRKFEQIKQDRISRSQGVNLYVKNLDDGIDDEC
LRKEFASFGTITSAKVMTKGGRSKGFGFVCFSSPEEAGKAVAEMNGRNVSTKPLFVALAQ
RKEERQAYLTRQHIQRMTSARPVPNQVINPYQAAPPPAYFLAPIPQAQNRTAAYFPAAAQ
VAQLCPSPRWATAGACSEHYQNLPAGVRTSASSPPGPASQPPRLMSGQRAPSQALSPQPD
TPLAAVCAVPQYMFAPGIRSSSNHMPPTQPTGHTPKPLTASVLASAPPLEQKQMLGECLF
PLIQNMHQDLVGKITGMLLEIDNSELLHMLESPESLSSKVDEAVAVLQAHQVKESCQNSY
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgctgtacgtgggcgacctgcacgtggacgtgaccgaggctatgctgtatgag
aggctgagccgcgtcggggtcattttgtccatccgtgtatgtcgagacatgatgaccggc
cgctcgctgggatacgcgtgcgtcaacttccagcagctcgcagacgccgaacacacactg
gacaccatgaacttcgacctgatcaaggggcagcccatgcgcataatgtggtggcagcgg
gaccccacgctgcgggagagcggcgtgggcaacatcttcatcaagaacctggaccgctcc
atcgacaacaacgtcctgtacgacatcttctccatcttcggcaatatcctgtccggcaag
gtggtgtgcgacgagcacggctccaaaggttacggctttgtgcactttgagactcaggag
gcggccgagcgagccattgccgagatgaacggcgagctgctcaaggaccggaaagtcttt
gtgggccacttcaaatcccgcaaggagcgcgaggccgagctggcggtccaagccaaggag
ttcaccaacgtttacgtgaaaaactttggcgtggacgtggacgacaacacgctgagggag
atcttcaagacgttcggaagcaccaccagcgtccgcgtcattatggacgaacgcggctca
tgccggggcttcggctttgtcagctttgccaggcacgaggacgcccagaaggcagtggac
gagatgaacgggaaggagctccacggcaggatgatctacgtcagccgcgcccagaagaag
gtggagcggcaggccgagctcaagcgcaagtttgagcagataaagcaagatcgcatctcc
cgcagccagggtgtcaacttgtacgtgaagaatctcgacgacggcattgacgacgagtgc
ctgcgaaaggagttcgcgtccttcggcaccataaccagcgccaaggtgatgacgaagggc
gggcgcagcaaaggcttcggcttcgtctgcttctcgtcgccggaggaggccggcaaggcg
gtggcggagatgaatggccgcaacgtttccaccaagccgctcttcgtggcgctggcccag
aggaaggaggagcgccaggcctacctgacccgccagcacattcaacgcatgaccagcgcg
cggcccgtgcccaaccaggtcatcaacccctaccaggcagcgccgcccccggcgtacttc
ctagcgccgatccctcaggcgcagaaccgcactgccgcttacttcccggcggccgcccag
gtggcgcagctgtgtccgagccctcgctgggccaccgcgggtgcctgctcagaacactac
cagaacctccctgccggcgtacggacttcggcgtcgagtccgcccgggcccgcctctcaa
ccgccccgtttgatgtccggccagcgtgcaccgtcccaggctctgagcccccagcccgac
accccgctcgccgccgtgtgtgcggttccgcagtacatgttcgcccctggaatccgcagc
tcctcgaaccacatgccgcctacacagccgaccggccacactccgaagcctctgacggcg
tccgtgttggcttctgctcctccgctggagcagaagcagatgctcggcgagtgtttattc
ccgctcatccagaacatgcatcaagacctggtggggaagatcaccggcatgctgctggag
atcgacaactcggagctgctccacatgctggagtcgcccgagtcgctcagctcaaaggtg
gacgaggccgtggccgtgctacaggcccatcaggtcaaagagtcgtgccagaattcttac
tga
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