Phycodurus eques (leafy seadragon): 133396512
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Entry
133396512 CDS
T09682
Symbol
topbp1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133396512 (topbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pee03032
]
133396512 (topbp1)
03400 DNA repair and recombination proteins [BR:
pee03400
]
133396512 (topbp1)
DNA replication proteins [BR:
pee03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
133396512 (topbp1)
DNA repair and recombination proteins [BR:
pee03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
133396512 (topbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
YscK
Motif
Other DBs
NCBI-GeneID:
133396512
NCBI-ProteinID:
XP_061522443
LinkDB
All DBs
Position
21:complement(2570621..2584099)
Genome browser
AA seq
1511 aa
AA seq
DB search
MRLDIMSKGDKEGFIVKFVGSKGQTSEYAAKAYEAIMELQSEKYLKKIDEEAVLKMDQKD
KSLFVFSDFDTPAFQHCKNLGCRIVSPLVVVFCLQQQRCVPKAEKPVYNMAMDDITVSCT
SLDKTTRAEVMNLVQLMGGRVYLDLNVSVTHLIAGEVGSKKYLVAASLGKPILLPSWVKE
CWESSQNSLFRYTELPLEGHLCPVLRGCTVCVTGLSSTERKEVQRLCEQHGGRYTGQLKI
NECTHLIVNETSGQKYECARKWNVYCVALHWLFDSIEKGSCQDESRYAVERRTSKSSQPN
TSTPTGSGQKEEGPSLLGLSHISVNTSVTINDTALTNGTVSRVEAPDPIESLDLTVCPAE
DVLDGCKLYLCGLPVKKLDKLRRLVNAAGGLRFNQPSEELTHVVMGEPDQDLKTFLSRAT
HRPHVVTVQWLLDSFSKGRLLPEEDFLHLDCLPPAPAEVLSTPASRSSVGPPAASPSTPK
LKQAEEDLLSQYMDDDMTVIDVAPAAEIESRRSISLPAEQSWTLNHGARPQSDYTVQEAS
EAGLFAGKRFLLQGFGAEAEAQLSLLVRENGGRVLASRTRAVADYAVVPLLGCSVEATVD
EVVTDTWLAMCVERECLLELYSNPLFTPVPVMDGHFPLKDCILSFSQFTGAERESLVELA
KHLGANVQDYFVRLANPKKGMLASTHLVLQSPDGTKYQAAKKWSLPAVTMHWIMASARTG
QRVAEERFLIDLPPSPEREEESFVAASQRTSMPAPAQPARSFPDIPLLGFQSGKAVTPLD
LGRFQSKMFHSVLDEMKSKKDVATPKQSQEDGRRKQLCKEPSLQLDTPSRFLSRDQLFRP
SFNVKDALEALDTPGGRSNPNESAETPLTDLINRNMKVALANSARASDVANMQAVSASPE
LSTTRKEAVQKEAGLLSGIVICVGKKLSKMQSELYAMAASLGADFRWACDDTVTHYIYQG
RVGDNSREYRGMKERGLHVVSQHWLKACAEEQRHVSESLYPFTYNPKMSLNLSQVPSSSQ
RSPPVTRPQLRDITEATDDNVGPNDSELKAVEDPSTSHHTSDGSEDQDGLADKNDISEAL
EMRENLQRALQEIMSATKKTTGRRMSVRLSRTASAGADSAPNTPSGSRRTLEALRVSRAA
ALDLNTEPSQSEQIVWDDPTAREERAKLADNLQWPGSPSQHSEPQAPPPPTAVQHDAQLK
DSMTDSDLVEMEACDVIDQQMGKKGSALPQEEPRNNILTPEAPSIAIPTVAPEPEEESEE
VKTPPRFQLSSLSPQERIDYSHLIEELGGVILDKQSFDPSCSHIIVGTPLRNEKYLAAMA
AGKWILHRSYLEACRSVGRFIPEEDYEWGSSSILDALPSITSQQRRLALAAMRWRKTLRG
PTEQGGAFSGWTVMLNIDQSREAGFRRLLQSGGAQVLPSASPSMYKVATHLFADFSRLRP
GDFRADVSEASAQNVTCLKPEYIADYLMQEPIPPTALYLLAESPPGEAPGTPSLKRKAAE
RTSRLKKSRLH
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atgaggttggacatcatgtccaaaggcgacaaggagggctttattgtcaaatttgttgga
agtaaaggacagacatcagagtatgctgccaaagcttatgaggctattatggagctgcag
tcggaaaagtacctcaagaagatcgacgaggaagctgtgttaaagatggaccagaaggac
aagtccctctttgttttcagtgactttgacactcctgccttccagcactgcaagaatctc
ggctgccggatcgtgagtccgctggtggtggtgttctgcttgcagcagcagcgttgcgta
cccaaagcggagaagccggtctacaatatggccatggacgacatcaccgtctcctgcaca
agcctggataaaacgactcgggccgaggtgatgaatttggtgcagctcatgggcgggcgt
gtctatctcgacctcaacgtgtccgtcacccacctgattgctggtgaggtgggcagtaaa
aagtacctggtggccgccagcctgggcaaacccatcctgctcccttcctgggtcaaagag
tgctgggagagctctcaaaacagtctgttcaggtacacggagctgcccttggagggccac
ctgtgcccggtgctgcggggctgcaccgtgtgcgtgacaggtctctccagcaccgagcgc
aaagaagtgcagcgtctgtgcgagcagcacgggggccgctacaccggccagctcaaaatt
aacgagtgcacccacctcatcgtcaacgaaacctcaggtcagaagtatgagtgcgcacgc
aaatggaatgtgtactgcgtggctctgcactggctcttcgacagcatcgaaaaaggctcc
tgtcaggacgagtcccgctacgccgtggagcgccggacctccaaaagcagccagccaaac
acgtccacgcccaccggctccggccagaaggaagagggtccttctctgctgggtttgagc
cacatctctgtcaacaccagcgtgacaataaatgatacggccctcacgaatggaaccgtc
agccgggtggaagctccggacccgatcgaaagtctggatctgaccgtgtgccccgcagag
gacgtcctggacggctgtaagctttatctctgcggcctgcctgtgaagaagctggacaag
ctgcgtcgcctggtgaacgccgcagggggtcttcgcttcaaccagcccagcgaggagctc
acacatgtggtcatgggagaaccagaccaggacctcaagactttcctgtccagagcaact
cacagacctcacgtggtgacagtccagtggctgttggacagcttctccaaaggccgcctc
ctcccagaagaagacttcctccacctcgactgtctgcctcccgctcctgcagaggtgttg
tccacgccggcctccaggtcctcggtcggaccccccgccgccagtcccagcacaccaaaa
ctgaagcaagcggaggaggacctactctcgcagtacatggatgatgacatgacagttatt
gacgtggcgccagcagccgagatcgagagcaggaggtccatcagcttgcccgccgagcag
tcctggaccctcaaccacggggccagaccacagtcagactacactgtgcaggaggccagt
gaggcgggtctctttgccggaaaacgattcctcttgcagggcttcggcgccgaggccgag
gctcaactttccctgttggtgagggagaacggaggtcgggtgctggcgagccgcacgcgt
gccgtagctgactacgccgtggtgcctctgctgggctgttctgtggaggccacggtggac
gaggtggtcactgatacatggctggctatgtgtgtggagagggagtgcctcctggagctt
tactccaatcctctcttcactcccgttcccgtgatggatggacatttccctctcaaggat
tgcatcctttctttcagccagttcacaggagccgagagggagtccttggtggagctggcc
aagcacctgggagccaatgtccaggactactttgtgcgcttggccaaccccaaaaaagga
atgctggccagcactcacctggtgctgcagagccctgacggcaccaagtaccaggcggcc
aagaagtggagtctcccggcagtcaccatgcactggatcatggcgtcggcgaggaccggc
cagagggtggccgaggagcgcttcctgattgaccttccaccttctcctgagagggaggag
gagagttttgtcgccgcctcccagaggacgtccatgccggcaccggcccaaccggcgcgc
tcctttccggacatcccgctgctaggttttcagagcggcaaggcggtcacgccgctggat
ttgggacgctttcagagcaaaatgttccactccgtgttggacgagatgaagtcgaaaaaa
gacgtggccacgcccaagcaaagccaggaggacggccgcaggaagcaactctgcaaggag
ccctcgctgcagctggacacgccgtcccggttcctcagcagggatcagctcttcaggccc
tcattcaatgttaaggatgccttagaggcacttgacactccaggtgggagatccaacccc
aacgagagtgcggagacgccgctgacggacctcatcaacaggaacatgaaggtggcgctg
gccaacagcgcccgcgccagcgatgtcgccaacatgcaagcggtttctgccagccccgag
ctcagcaccaccaggaaggaggctgtacaaaaggaggccggcctgctgagtggcattgtg
atctgcgtggggaagaagcttagcaagatgcaaagcgaactgtacgccatggccgcctcg
ctcggagcagacttcagatgggcctgcgacgataccgtcacccactacatctaccagggc
cgagtgggtgacaacagtcgggaataccgaggcatgaaggagagggggctgcatgtggtc
tcgcaacactggttgaaagcttgcgccgaggagcaaaggcacgtctcggagtctctttat
cctttcacctacaaccccaagatgagcctgaacctcagtcaggttcccagcagctcgcag
aggtctccgcctgtcacgcgaccacaactacgagacatcaccgaggccacggatgacaac
gtgggcccaaatgattctgagctcaaggcagtagaagacccttctacctctcaccacaca
agcgacggaagcgaagatcaagacggccttgcagacaagaatgatatttcagaggcgctg
gagatgagagagaacctgcaaagagcgctccaagagatcatgtctgccaccaaaaagacg
accggcaggcggatgtcggtgcggctcagtcggacggcgtccgccggcgccgactctgcc
cccaacactcctagcggcagcaggcgcactctagaagcgttaagggtctcccgcgcagct
gctctggatctcaacacggagccctcccagagcgagcagatcgtttgggacgatccgaca
gccagggaggagagggccaagctggccgacaacctacagtggcccggtagtccttcgcag
cactcggagcctcaggcgccacccccgccgaccgcagtgcagcacgacgcgcaactcaag
gactccatgaccgactctgacctggtggagatggaggcttgtgatgtcatcgaccagcaa
atgggcaagaagggctcagcgctcccgcaggaggagccgcggaataacatcctgactccc
gaagcccccagcatcgcgatccccacggtagctcctgagccagaggaggaaagtgaagaa
gtgaagacgccgcccagattccagctgtcctccctcagtcctcaggaacgcatcgattac
agtcacctcatcgaagagctcggtggcgtcattctggacaagcagtcgtttgaccccagc
tgctcccacatcatcgtaggcacaccccttcgcaacgaaaaatacctggcagccatggcg
gccggcaaatggatcctgcatcgctcatacctggaggcttgccgttctgtgggccgcttc
ataccggaggaggactacgagtggggcagcagctccatcctggacgcgttgccctccatc
acctcgcagcagaggcgcttagcgttagctgccatgcgctggaggaaaaccttgcgggga
cccacggaacagggcggagccttcagcggatggacggtgatgttgaacatcgaccagagc
cgagaagccggcttcaggcggttgctgcagtcgggcggggcccaggtgctgccgagcgcc
tctccttcaatgtacaaggtggccacgcacttgtttgccgacttcagccgcctgcggccg
ggcgacttccgtgcggatgtgtccgaggcctccgcccaaaacgtgacttgcctgaagccc
gagtacatcgccgactacctaatgcaggagcccatcccacccacggcgctctacctcctc
gccgagagcccccccggtgaggctcccggcacgccgtcacttaaacgcaaagcggcagag
cgcacctcccggctgaaaaagtctcgactgcactga
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