Entry |
|
Name |
(RefSeq) collagen alpha-1(XVIII) chain-like isoform X1
|
Organism |
pee Phycodurus eques (leafy seadragon)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
21:complement(1114605..1151316)
|
AA seq |
1250 aa
MNLRIPPWCIGLFLVLSSSAGFQLDARGSQGVQDLTELIGVPLPPSVSFVTGFQGYPAYS
FEADANVGRLTKAHVPDPFYYDFAITVTAKPTTRRGGVLFAITDAYQKVVQLGVALSEVE
DGSQRVVFYYADPVTGGKTQEAASFKMADLTGRWARFTLTVQGAEVRLFMDCEEYHRVAF
ARSPQPLTFETNSGIFVGNAGGTGLPHFVGSIQQLVLKSNPTAPDDQCEEDQPYASGSGD
DVYEDMEGKDEVKKVVEEREYKEEVPQPTSSTPVRAPPTEAPYSFDDDEAGDDVEEASGQ
EMQAPAPAVRPAHSATAASKSDSVSTGQKGERGEPGAQGPPGPAGQPGQDSESAGEPAPR
GPPGPPGPQGPPGAAGKDGQHGTKGENGAPGANGLPGFPGLQGEPGPKGEKGDAGVGHPG
LPGPPGPPGRFSSKFQEGSGSASGFDDFDDDPEIIRGPPGPPGPRGPPGSPSQEVLPGPP
GVPGRDGQKGAAGLPGIDGNKGEQGPAGQKGDMGKPGVKGQPGPKGDQGPQGFPGLPGPE
GPEGRVGPQGPAGLPGPPGPPAKGFPLGLEDLEESGLLSGPAAERLRGLPGVPGVQGPKG
EEGLRGPAGEPGLKGEPGAAGPLGLAGPEGKKGSEGPKGDAGALGQKGEPGRDGLSLAGP
PGPPGPPGPAVDLQDLLLNGTDGVFNLSGIFEAQGLAGQQGPKGDGGVQGVEGPPGLKGE
KGEPAMFISENGSTYDPSTLKGAKGYKGDVGASGLPGPLGPMGMPGPKGDLGFPGRPGRV
GVPGLKGEKGDSVGKPGLPGLPGRPGRPGMFRCPNGVSEPLPMHPKDGFSYTTVFPVPAR
PFCKIPINPDGSAVMGDNQDGRKGQKGERGLPGIPAPPNTFKGRLGVKGEMGVDGEKGEK
GETGLPGQPGAPGKPGPVGPKGESVLGPQGPRGEPGHPGAPGFGRPGPAGPPGPPGEVGG
LSFGFGKKDVKIPGPAGPPGPPGPPGPAGPRGPLGGSAAVSTFSTVESMMRRTVREAEGM
LAYVLATGSLYLKVAEGWKEIQLGSLLHLSSNVIPQDEPGAAQQITGGTIERVRSTKDRL
NLVALNQPHTGDMTGLDTADRLCYEQAKAMGLPPNYRAFVSSNKQDLVHVVYPGFRDTLP
ITNLRGDVLFRNWRSIFNGEGGPLNTRIPIYSFDGRDVLADPFWPEKSIWHGSSSRGLRV
PDKHCETWRADHVSVAGQSSGLTSGLLLGQQTRSCSNEYAVLCVETHKNP |
NT seq |
3753 nt +upstreamnt +downstreamnt
atgaacttgcggattcctccctggtgtattggattatttctagtcctgagctcctcggca
ggtttccagctggacgctcgagggtctcagggcgtccaggacctgaccgagctgatcggc
gtccccctcccgccgtccgtctccttcgtgacgggcttccaggggtacccggcctacagc
ttcgaagcggatgccaacgtgggccggctcaccaaggcccacgtgccggaccccttctac
tacgactttgccatcaccgtcacggccaagcccaccacgcggcggggcggcgtcctgttc
gccatcaccgacgcctaccaaaaagtggtgcaactgggcgtggcgctgtctgaggtggag
gacggttcccagagggtggtcttctactacgctgaccccgtcacgggaggcaagacccag
gaggcggcttccttcaagatggccgacctgacgggacgatgggccaggttcaccttgacg
gtgcagggcgccgaggtgcgtctcttcatggactgcgaggagtaccaccgcgtggccttc
gccagaagcccccagccgctcaccttcgagaccaactcggggatctttgtgggcaacgcg
gggggcacgggcctgccccactttgtgggctccatccagcaactggtgctcaagtccaat
cccacggcccccgacgaccagtgcgaggaggaccaaccttatgcgtctggaagcggcgat
gatgtttacgaggacatggagggaaaagatgaagtcaagaaggttgtggaggagagggaa
tataaagaggaagtgccgcagcccacatccagtaccccggtccgagctccccccaccgag
gcgccatacagtttcgatgacgatgaagctggagacgacgtcgaagaagcttccgggcag
gaaatgcaggcccccgcacctgcggtgcgaccagcccattcagcaacagcagcatccaag
tccgactctgtgtcaacaggtcaaaaaggtgagagaggtgagccgggagcgcagggcccc
ccgggacccgccggccaaccggggcaagactcggaatcggcgggcgaacccgcaccccga
ggtccgccgggacctcctggacctcaaggcccgcctggagctgcagggaaagacggacag
catggaacaaaaggagaaaatggtgctccgggagccaatggccttccaggatttccaggc
cttcagggagagcctggccccaaaggagagaagggcgacgctggcgtcggacatcccggc
cttccgggacctcccggacctccgggccgcttctcctccaagttccaggagggctcgggc
tcggcttcgggcttcgacgacttcgacgacgatccggagatcattcgaggaccccccggc
ccaccgggaccacgcggcccccccggatccccgtctcaggaagtcctacctggaccaccc
ggcgttcctgggagagatggacaaaagggagcagctggacttcctggaattgatggaaac
aaaggagaacaaggacccgctggacaaaagggagacatggggaaacctggtgtgaagggc
caaccaggacctaagggagaccagggccctcagggcttcccaggacttcccgggcccgag
ggtccagagggcagggtcgggccccaggggccagccggccttcccggaccgcccggcccc
cctgccaaaggcttcccgttgggcctcgaggacctggaagaatcggggctgctcagtggt
cctgcagcggaacggttgcggggtctcccaggagttccaggagttcaaggaccaaagggt
gaagaaggcctccgaggtcctgctggagagccaggtctcaagggggagcccggcgctgcg
ggtccactgggtttagcaggaccagagggcaagaaaggttcagagggtccgaagggggat
gccggcgctctgggacaaaagggcgagccaggacgtgacgggctcagtctagcgggccct
ccgggacctcccggacctccgggacccgccgtcgacctccaggatctcctcctcaacggc
acggacggcgtcttcaacctctcggggattttcgaggctcagggattggctggacagcaa
ggacccaagggagacggcggggtgcaaggtgttgaaggacctccaggacttaagggcgag
aaaggcgagccggcaatgttcatctctgagaacggatccacctacgacccgtctactctt
aagggggccaaaggatacaagggtgatgttggtgcaagtggacttcctggaccactcgga
ccaatgggaatgccgggaccaaaaggagatttgggtttccccggaagacccggtcgtgtc
ggtgtgccgggactcaaaggagagaaaggcgactctgtcggcaaacctggactgccaggc
ctgcctggacgacccggccgccctggaatgttccgatgccccaacggggtaagcgagccg
ctcccaatgcatcctaaagatggattttcatatacaaccgtgttccccgtccccgccaga
cccttctgcaaaataccgattaatcccgacggaagcgccgtgatgggtgacaatcaggac
gggcggaaaggacaaaagggagaacgaggccttcctggcattccggcgccacctaacacg
ttcaaaggacgcttgggagtgaaaggcgagatgggcgtcgacggagaaaaaggagaaaag
ggcgagacggggttgcccgggcaaccgggtgctcccgggaaaccagggccagtgggaccc
aaaggcgagtccgtgctgggaccgcaaggcccccgcggagaaccgggccacccgggcgcc
ccgggcttcggcagacccggtccggcaggaccccccggaccgccgggggaagtcggaggc
ttgtcgttcggctttggtaaaaaagatgtgaaaatccccggaccggccggaccccccggg
ccccccggacccccgggacccgctggcccacgcggacccttgggaggctcagccgctgtg
agtacattttccacggtggagtcgatgatgaggaggactgtgagggaggccgagggaatg
ctggcctacgtcctggccacgggaagtctctacctcaaggtggccgaaggctggaaggag
attcagcttggcagtctgctccacttgtccagtaacgtcatcccacaagatgagcctgga
gctgcccagcaaataacaggcggcacgatcgagcgagtgcgctccaccaaagacaggctc
aacttggtggcgctgaaccagccgcacacgggcgacatgacgggcctggacacggccgac
cggctgtgctacgagcaggccaaggccatgggcctgccccccaactaccgcgccttcgtc
tcctccaacaagcaggacctggtccacgtggtctaccccggcttccgagacaccttgccc
atcaccaacctgaggggagacgtgctcttccgcaactggaggtccatcttcaacggcgaa
ggagggcccctcaacaccaggatacccatttactccttcgatggacgcgacgttttggcc
gatcctttctggcccgagaagagcatctggcacggctcgagcagccgcgggctccgcgtg
cccgacaagcactgcgagacgtggcgcgccgaccacgtgtccgtggcgggccagtcctcc
ggcctgacctcgggtctgctgctgggccagcagacgcggagctgctccaacgagtacgcg
gtcctgtgcgtggagacccacaagaacccctga |