Phycodurus eques (leafy seadragon): 133399054
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Entry
133399054 CDS
T09682
Symbol
ddx20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
pee
Phycodurus eques (leafy seadragon)
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pee03041
]
133399054 (ddx20)
Enzymes [BR:
pee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133399054 (ddx20)
Spliceosome [BR:
pee03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
133399054 (ddx20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
CMS1
AAA_19
Motif
Other DBs
NCBI-GeneID:
133399054
NCBI-ProteinID:
XP_061526133
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All DBs
Position
1:complement(49349984..49359914)
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AA seq
777 aa
AA seq
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MAASIRKAAHDIERRNRTDDVILTEGIDFRSLLLSEVVLDGLSAAGFQKPSPIQLKAIPL
GRCGLDLIVQAKSGTGKTCVFCTIALDSLILENSATQVLVLAPTREIAVQIHSVVMAIGC
AMEGLQCHVFIGGRPVSQDKLHLKKCHVAVGSPGRIKQLIDLGMLSTASIRLFVLDEADK
LLEEGSFQEQINWIYSSLPVNKQMLALSATYPESLAQHLTRYMRDPTFVRLNPKDMELKG
LRQYYKLVQSHPLPHKIFEEKVQHLLELFGKIPFNQALVFSNLHTRAQHLADILSSKGLP
AVCISGSLSQEQRLEAMSKLKQYQCRVLISTDLTSRGIDAEKVNLVINLDVPQDWETYMH
RIGRAGRFGTQGLAVTYCCHGEEENKMMAIAQKCGLSLSALPPTIDAGLMAEQCDWDVCA
EASTVGRRAFSTNEKKKAARSKASSPAVSANITEEAGEPDRSRTEARVGAEGLSAKEYPA
EKMLLQNPSKAAPTRKELQDALPKIPPLTSFKSRAPAFMTFEEAERDFQAFIMTGLGRSV
EIIREFSGQGDGGDPNGHREFATLEDDGGEICQGWKLERNPAKATSGSSRSEDDMEENSE
RKYNMTAGSESTAATHTQTDASPKCAVAQAKTESFRPKAPGTFPTTNSTGSRTSPLTANF
KSALGTKADTQTKLVSSAKASRKDLAKKKGRLEKWSSRKPETMRTQQKWERDDDKYDKEE
DSSAESYWTECARAWNAYYASMSPFGEQSYRGYYSAAHNWMAAYRMNTVYMEELLKH
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccatcaggaaagcagcccacgatatagaaaggcgaaacaggacggacgat
gtcattttgacggagggaatcgacttcaggtcgctgttactgtctgaggtcgtgttggac
ggactgtcagcggctggttttcaaaaaccatccccgattcagctgaaggcgatcccgctc
ggccgctgcggactcgatttgattgtacaggccaaatctggcacgggaaagacatgcgtg
ttctgcacaattgctttggattctctgatcctggaaaattctgccacacaggtcctcgtg
ctggctcctacgcgagagatagccgtgcagatccactccgtcgtgatggcgatcggctgt
gccatggagggcttgcagtgccacgtgttcatcggggggcggcctgttagtcaggacaaa
ctccacctgaagaaatgccacgtagctgtgggctcacctggtcgaatcaagcagctcatt
gacctcggcatgttgtccactgccagcattcgtctctttgttctggatgaggctgacaag
ctgctggaggagggcagcttccaggaacagataaactggatctactcctctctgcctgtg
aacaaacagatgctggcactctctgcgacctacccagaatctcttgctcagcaccttacc
cgctacatgagagatcccacttttgtcagactcaaccccaaggacatggaactcaaaggc
ctgcggcagtattacaagctggtgcagtcccatccgttacctcataagatcttcgaggag
aaggtgcagcacttgcttgagctcttcggcaaaatacccttcaaccaagcccttgtattc
tcgaatctgcacacaagggctcagcatctggcagacatcttgtcctctaaaggcctaccc
gctgtttgtatctcaggcagtctgagtcaggaacagagacttgaggccatgtccaaattg
aagcagtatcagtgcagagtgctaatctccactgacctgacctccagaggcatagacgca
gagaaggtcaacctggtgataaatctggacgtgccgcaggactgggaaacgtacatgcac
cgaatcggacgagccgggcgcttcggcactcaggggctggctgtgacctactgttgccac
ggtgaagaggagaacaagatgatggccattgctcaaaagtgcggcctgagtttgtcagcg
ttgccacccaccattgatgctgggctgatggctgagcagtgcgactgggatgtctgcgct
gaggcttcaactgtgggccgccgagcgttctccacgaatgagaaaaagaaggcggcgcgg
tccaaagcgtcctcgcctgctgtttccgccaacatcacggaggaggccggggagccagat
aggagccgcacagaagcccgtgtcggagctgaaggcctgtctgcaaaagaatatcctgca
gagaaaatgctgttgcagaacccctctaaagcggcacccactcgtaaagagttgcaagac
gcgctgcccaagatcccgccgcttacctcgtttaagagccgcgcgcctgcgtttatgacc
ttcgaggaggctgagcgggacttccaagcgttcattatgacagggctaggtagatcggtg
gagatcatcagggagttcagcggccagggagacggcggtgatcctaacgggcacagagag
tttgccacgcttgaggacgacggaggtgagatctgtcaaggatggaagttggagcggaac
cctgcaaaagcgacttctggttcttcacgctctgaagatgacatggaggagaactctgag
cgaaagtacaatatgactgcaggcagtgagagcactgcagccacgcacactcagacagac
gcgagccctaaatgcgccgtagcacaagcgaagactgagtcatttagaccaaaagctccc
ggaacattcccgacaacaaactcaacaggcagcagaacttcacccctgactgccaatttt
aaatcagcgctcggtacgaaagcggacactcaaactaaactggtgtcttcggccaaagcg
agtagaaaggatttagcaaagaagaaaggtcggctggaaaaatggagcagcaggaagccg
gagacaatgcggacacagcaaaaatgggaaagggatgacgacaagtatgacaaagaagaa
gactccagtgctgagagttactggacagagtgcgccagagcctggaatgcttactacgcc
tcgatgtctccttttggggagcaaagttaccgaggctactacagtgccgctcacaactgg
atggcagcgtaccgcatgaacacagtttacatggaggaactgctcaaacactga
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