Phycodurus eques (leafy seadragon): 133399087
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Entry
133399087 CDS
T09682
Symbol
tgfbrap1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1 homolog
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
133399087 (tgfbrap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pee04131
]
133399087 (tgfbrap1)
Membrane trafficking [BR:
pee04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
133399087 (tgfbrap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
133399087
NCBI-ProteinID:
XP_061526181
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All DBs
Position
2:28058363..28070064
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AA seq
877 aa
AA seq
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MSVKAFELIPAVERDLLMGDKARINIECIECCGKHLYVGTNDCFIHHFLLDEVTSPKGRL
TYSTQKLLHKYLGLKKPVAELRAASALERLIVLCDGTVFLVDMVTLENVPSTVGGGARIK
GVTTFCINENPVNSDPFCMEMGVLSLKRRTVQIYMVYEGRVQLVKEVSTPEQPCAVSLDG
YFLCLALATRYMILNYNTEAAQDLFPYNSEERRPIVKRIAREEFLLAAPGGLGMFANAEG
ASQRAPVNWSETVIGAAVCFPYVVALDESFITIHSMLDQQLKQTLSFRDGHILQDFEGKV
IVASTKAVYVLVPLPLERQIQDLLASCRVEEALVLAEGAKRNIPKEKFLVLHKRILQQAG
FIQFGQLQFVEAKEHFRKGQLDVRELISLYPLLLPASSSFTRCHPPLHEFADLNHLAQGD
HKKVMKCKKFLISYLTEVRSTEVPNGCKEDVDTALLKLYAEQDHESLLDLLASDNACLLA
DCVPWLEKYHKYFALGLLYHSNGQDTAALQMWIRVADKELQDFTKPDLFEYIVDFLSSTA
DVNLVWKYTNWALHKNPTTAVHIFTKRPVGKDQSDLKPDDVITYLEKHREAVLLYLEHLV
LERQIQEEQFHTYLADLYLERVLSLVSESPINEKELRRAREKLQALLRESNLYSAQYILD
KMENCEQLLLERATLYGKLEDHDKALNILVHKLGDFQSAEAFCIWTSSCRDSAYRQQLFH
QLLGMYLDKSATGKSQSSVCSDSGDLQMAAVDLLNRHGELFDPVHVLRTLPDGWSLQLLR
PFLGQAVRASMHASRTSQIALGLAHSEHLQLLHDKLKETKKPIAVSAKKGCHLCHNTFSD
TEVVCLPGGVPVHTHCFAQRVRDSPTKRQLTNSSNHT
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgaaggcctttgagctcatcccggctgtggagcgggacctcctcatgggagac
aaggctcgcatcaacattgaatgtatagaatgctgtggaaaacacttgtatgtgggaacc
aacgactgcttcatccaccatttcctgctcgacgaggtcacttcccctaaagggagacta
acttactcaactcaaaaactgctgcacaaatacctaggccttaagaagccagtggctgag
ctgcgggctgcctctgctttggagcgtctcatagtgctttgcgatggaacagtttttctt
gtggacatggtgactctggaaaatgtgccgtcaacggtcggaggtggcgctaggattaaa
ggtgtgaccacattctgcattaatgagaatccagtgaacagtgatcctttctgcatggaa
atgggtgtcctttccttgaagcgaagaacagtgcaaatttacatggtctatgagggcagg
gtacagttggtgaaagaggtgagcacgccggagcaaccctgtgctgtcagtctcgatggt
tacttcctgtgtctagcgttggctacgcggtacatgatcttgaactacaacacagaagcc
gcccaagatcttttcccttacaacagtgaggagcggaggcccattgtaaagaggattgcc
cgggaggagttcctcttggcggctccaggtggtcttggaatgtttgccaacgctgaaggg
gcatcgcaacgggctcccgtcaactggtctgagactgtcatcggtgcagctgtttgcttc
ccatatgtggtggccttggatgaaagcttcatcaccatccacagcatgttggatcaacaa
ctaaaacagacactttcattcagggacggacacattctgcaagactttgaagggaaggtc
attgtggcatccactaaagctgtatacgttctggtgcccttgccgcttgagagacagatc
caggacttactggccagctgcagagtggaggaggcacttgtccttgcagagggagcaaag
agaaatattcctaaagaaaagttcttggttttgcacaaaagaatcctgcagcaggcaggc
ttcatacagtttggccaacttcagtttgtagaagcaaaagaacatttcaggaaaggtcag
ctggatgtgcgtgagctgatttctctctacccactgctactgccagcttcatcttccttc
acacgctgccaccctcctctccatgagtttgcagatctcaaccacctggcacagggtgat
cacaaaaaagtgatgaaatgcaagaaattcctgatcagttatttgacagaggtccgaagc
acagaggtacctaatggttgcaaagaggatgtggacactgcgttgttaaaattgtatgct
gaacaggatcatgaaagccttcttgacctgctagcatcagacaatgcctgcctgctcgca
gactgtgtcccgtggctggagaaataccacaaatattttgcacttgggctgctttaccat
tctaatggtcaggatacagcagcacttcagatgtggattcgtgttgcagacaaggaactg
caggattttacaaaacctgatctctttgagtacattgtagattttctcagctccactgcc
gatgtgaaccttgtgtggaagtatacaaactgggcccttcataaaaatcccactacagct
gtccacatcttcactaagcggcctgttggtaaagaccagtcagacctgaagcctgatgat
gtcattacatacttggaaaagcacagggaggctgttcttctctacttggaacaccttgtg
ctagaaagacagattcaggaggagcaattccacacatatctggcagacttatacctggag
agggtcttatctttagtatcagagtcgccaatcaatgaaaaggagctcaggagagccaga
gagaagctccaggcgctactcagggagtcaaatctatacagtgctcagtatattttagat
aagatggaaaactgtgagcaactgctgctagagcgtgcaactctatacggaaaattagaa
gaccatgataaagcactcaacattttagtgcacaagctcggagacttccaatctgccgag
gccttttgtatttggacctcgtcttgtcgggattctgcttaccgacagcagctgttccac
caactcctggggatgtatcttgacaaaagtgccaccgggaaatcccagtcgtcagtgtgc
agtgacagtggagatctacaaatggcagcagtggacctcctgaatcgtcacggagagttg
tttgatccggttcatgtgctgagaacactgccagatggctggtcgctgcaactgctacgg
ccctttctgggtcaagccgtaagagctagtatgcatgcctcgcgcacgtcccagattgca
ctagggctcgcccactccgaacaccttcaactactgcacgacaagttgaaagagacaaag
aagccaattgctgtatctgcaaagaagggatgccacttatgccacaacaccttcagtgac
acggaagtggtgtgccttccaggtggcgtgcctgtccacacacactgttttgcccaaaga
gttagagactccccaacaaagagacagttaactaacagcagcaaccacacgtga
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