Entry |
|
Symbol |
lsm1
|
Name |
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
|
KO |
K12620 | U6 snRNA-associated Sm-like protein LSm1 |
|
Organism |
pee Phycodurus eques (leafy seadragon)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:pee00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133399700 (lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pee03019]
133399700 (lsm1)
Messenger RNA biogenesis [BR:pee03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133399700 (lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
133399700 (lsm1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
3:complement(2825054..2826438)
|
AA seq |
133 aa
MNYVPGTASLIDEIDKKHLVLLRDGRTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIP
RGIFIVRGENVVLLGEIDVDKPCDTVLQQVSIEEILEEQRLKQQVKQETEKVKMQVLKDR
GLSIPKTDNLDEY |
NT seq |
402 nt +upstreamnt +downstreamnt
atgaactacgtaccggggacggccagtctcatcgacgagatcgacaaaaaacatctggtt
ctcctccgagatggcagaacactaattggctacctcagaagcattgaccaattcgccaat
ttagttttccatcagactgttgagcgcatccacgtgggcaagaaatttggtgacatcccc
agaggaatcttcattgtgcgcggagaaaatgtggtgctgcttggcgaaatagatgtggat
aaaccgtgcgatacggtcctgcagcaggtctccatcgaggagattctggaggagcagcgt
ttgaagcagcaagttaagcaggagactgagaaagtcaagatgcaggtcctgaaagaccga
ggcctctccatccccaaaactgataacttggatgaatattaa |