KEGG   Phycodurus eques (leafy seadragon): 133399700
Entry
133399700         CDS       T09682                                 
Symbol
lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
pee  Phycodurus eques (leafy seadragon)
Pathway
pee03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pee00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    133399700 (lsm1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pee03019]
    133399700 (lsm1)
Messenger RNA biogenesis [BR:pee03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     133399700 (lsm1)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     133399700 (lsm1)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 133399700
NCBI-ProteinID: XP_061527420
LinkDB
Position
3:complement(2825054..2826438)
AA seq 133 aa
MNYVPGTASLIDEIDKKHLVLLRDGRTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIP
RGIFIVRGENVVLLGEIDVDKPCDTVLQQVSIEEILEEQRLKQQVKQETEKVKMQVLKDR
GLSIPKTDNLDEY
NT seq 402 nt   +upstreamnt  +downstreamnt
atgaactacgtaccggggacggccagtctcatcgacgagatcgacaaaaaacatctggtt
ctcctccgagatggcagaacactaattggctacctcagaagcattgaccaattcgccaat
ttagttttccatcagactgttgagcgcatccacgtgggcaagaaatttggtgacatcccc
agaggaatcttcattgtgcgcggagaaaatgtggtgctgcttggcgaaatagatgtggat
aaaccgtgcgatacggtcctgcagcaggtctccatcgaggagattctggaggagcagcgt
ttgaagcagcaagttaagcaggagactgagaaagtcaagatgcaggtcctgaaagaccga
ggcctctccatccccaaaactgataacttggatgaatattaa

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