Phycodurus eques (leafy seadragon): 133399755
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Entry
133399755 CDS
T09682
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133399755 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pee03041
]
133399755 (usp39)
Spliceosome [BR:
pee03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
133399755 (usp39)
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
133399755
NCBI-ProteinID:
XP_061527520
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Position
3:4226380..4231662
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AA seq
509 aa
AA seq
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MITAVVSPKREREDDVDDEDNEDGGGKVAVPVKKGRGRVAEDRRSRHCPYLDTINRSVLD
FDFEKLCSISLSHINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPD
NYEIIDSSLEDITYVLKPTFTKQHISGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYAN
VVLQAFSNVPPLRNYFLEEENYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPH
EMLQAVVLCSKKNFQITNQGDAVDFMTWFLNAMHGALGGTKKKPTILTKAFQGSMRIFSK
KLPHPDLTPEEKEALLLTSEYQEQMSESTFFFLTLDLPTAPLYKDEKEQLIIPQVPLFNI
LGKFNGSTEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNV
DLREYLTEEAQVTEKNTTYDLVANVVHDGKPTEGAYRIHVLHHGTGKWYEMQDLQVIDIL
PQMITLSEAYIQIWKRQESGKDVNNHTGA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccgcagtggtttctccgaagcgtgaaagagaagacgatgtggacgacgaagac
aacgaggacggtgggggcaaagttgcagtgccagtcaaaaaaggacgaggtcgtgtagca
gaggaccgacgaagccgccactgcccgtatctcgacaccataaacaggagtgtgctggac
tttgactttgagaagctctgctcaatctccctctcacacatcaacgtttatgcctgcctc
atatgtgggaagtactttcaaggtcgaggtctgaaatcccacgcgtacacccacagtgtc
caatttactcatcacgtgttcctcaacctgcacacactcaagttttattgtctgcctgac
aactacgagatcattgactcttcactagaagacattacgtatgtgcttaaaccgacattc
accaagcagcacatttcgggtttggacaagcagggcaaactttacagagcctacgatgga
acgacttatctgccaggcattgttggcctcaacaacattaaagccaatgactacgccaat
gtggtcttacaggccttttccaacgtcccgccactgcggaactactttttggaggaggaa
aactatcgagggatccgaagaccaccgggggacatcatgttcctcctggtgcagcgcttt
ggtgagctgatgcgcaaactttggaatcccagaaacttcaaggcccacgtgtctcctcat
gagatgctccaggccgtggtgctttgcagcaagaagaacttccaaatcaccaatcaagga
gacgctgtggacttcatgacatggtttttaaatgcaatgcatggtgctcttgggggcaca
aagaaaaagccaacaatcctaacaaaagcattccaaggctccatgcggatcttctcaaag
aagttaccacacccagatttgacgccagaggagaaggaggcgctgctcctgaccagcgag
taccaagagcagatgtccgagtccacgttcttcttcttgacccttgatctcccaacagcc
cccttgtacaaggatgagaaggagcagctcatcatcccacaagttcctctcttcaacatc
ctgggcaagttcaatggcagcacagagaaggagtacaaaacatacaaggagaacttcctg
aaaagattccagttgaccaaactcccaccctacctcatcttttgcatcaaaaggttcaca
aagaataacttctttgtggaaaagaaccccaccatcgtcaacttccccatcacaaatgta
gatctccgtgagtacttgaccgaagaagcccaagtcacggagaagaacacaacgtatgac
ctggttgccaatgtggtgcatgatgggaaaccaaccgaaggcgcttacaggatacatgta
ctgcatcatggaactggaaagtggtacgagatgcaggacctgcaggtgatcgacatcctc
cctcagatgatcactttatcagaggcctacatccagatttggaagagacaggagagtggc
aaggatgtaaacaaccacactggtgcatag
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