Phycodurus eques (leafy seadragon): 133399812
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Entry
133399812 CDS
T09682
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03013
Nucleocytoplasmic transport
pee03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133399812 (thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
133399812 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pee03019
]
133399812 (thoc5)
03041 Spliceosome [BR:
pee03041
]
133399812 (thoc5)
Messenger RNA biogenesis [BR:
pee03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
133399812 (thoc5)
Spliceosome [BR:
pee03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
133399812 (thoc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
DUF2542
Motif
Other DBs
NCBI-GeneID:
133399812
NCBI-ProteinID:
XP_061527693
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All DBs
Position
3:5504207..5514731
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AA seq
683 aa
AA seq
DB search
MSSDTLKKRKAKVLRNEAATPEVKRGRGDADHQDVRIYNEEVELDGRDHEEDFLQFKESC
EGLATLMGEIQKLKANGAKDGSAEIERRRLQSCNHFMTLKKLNRLAHMRLKRGRDQTHEA
KQKVDVLHLQLQNLLYEVLHLQKEISKCLEFKSKHEEIDLVSEEDFYKDAPQEISRPQLT
KNDPHQLTLARLDWELEQRKRLAETYKESQATKEKIQKSIEVKKEHLRSLQPGLNAIMQA
SLPVQEYLAVPVEQTQKHTEIAQHLPPPLYVLFVQANAYGQACDKNLSVSISGDVDEAKA
MSKPPEDSQDDDSDSDAEEEQEKTKRRRPTAGGQLDDKRREMLKRHPLSLSFDLTCKDGS
ILNLYFYYLINLNIMTVKAKISASTDLTTAISAGYVKSETILSCLYSNDHGRETPNPANR
YQFDKVGIVSFADYVEELGHPYKWVQSLGGLHFPSDSSEGELVGSSLSASHMETTIKLLR
GRVLSRLALHKQFASLEHNIIPVISECLHLFPTKIISRLAQWTTITHEEYKDLTFTRHVT
DAGLAKETDMYFSGVIERGTARLQAAVVLNPRYPEISPLFSLSLSWKGERSGRSDDNLRA
MESEVNVFKNELQGPRPGYQLLTNQISRLCVCLDVYLETEEQDDGVEGPREFPREKMCLR
TVKGPNRLKPFKYNHPLGLFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagacacactgaaaaagcgaaaggctaaagttcttcgtaacgaagcagcaact
cctgaggtgaagcgaggcagaggtgacgcagaccaccaggatgtacgtatctacaatgaa
gaggtggagcttgatggcagggaccatgaggaggacttccttcagtttaaagagtcgtgt
gaaggtttagccactctgatgggtgaaatacagaagctcaaagccaatggggcaaaagac
gggtctgctgagattgaacggagacgcttgcagagctgcaaccacttcatgactttgaaa
aaactcaaccgtctcgctcacatgcgactgaaaagaggcagagaccagacccacgaggca
aagcagaaagtggatgtgctgcacctccagttgcagaatcttctgtatgaagttctgcat
cttcagaaggaaatcagcaaatgtttagagttcaagtctaaacatgaggaaatcgacctc
gtgagtgaagaagacttttacaaggatgcgccgcaggagatttctaggccacaactcacc
aaaaacgatccgcaccagctcacactggcacgattagactgggagcttgaacagaggaaa
agattggcagagacgtacaaagagtctcaggccaccaaggagaagatccagaagagtatt
gaggtcaagaaggaacacctgaggagcttgcagcctggtctgaatgccatcatgcaggcc
tctctcccagtgcaagagtaccttgccgtgcctgttgaacagactcagaaacacactgag
attgctcagcacctgccaccgcctctctatgtcctctttgttcaagccaatgcatatggc
caagcatgcgacaagaacctgagcgtgtctatcagtggggatgtagatgaggccaaggct
atgtccaaacctccagaggattctcaggatgatgacagtgactccgacgcagaggaagag
caggaaaaaactaagaggagacggccaactgctggcggccagctggatgacaaaaggcga
gagatgctcaagaggcacccgctgtccctctctttcgacctgacgtgcaaagatggcagc
atcctcaatctctacttctactacctgataaacctcaacattatgacagtcaaagctaag
atttctgcgtccacagacctcaccactgccatcagtgcagggtatgtcaaatctgaaacc
attctcagctgtctgtattccaacgatcatggaagagaaacacccaatccagccaaccgt
tatcagtttgataaagttgggattgtttcttttgctgactatgtggaggagctgggtcat
ccctacaagtgggttcagagtcttggaggtctacattttccaagtgactcctcagaaggt
gagcttgtgggcagttcattgagtgctagccatatggaaaccaccataaagctcctgagg
gggcgggtcctgtcccgcttggctttgcataagcagtttgcctctttagagcacaacatc
atccctgtcatcagtgagtgtctgcacctctttccaaccaagattatttcccggttagct
cagtggaccaccatcacacacgaggagtacaaggatttgacatttacacgtcatgtgaca
gatgctggtctggcaaaagagactgatatgtacttttctggagttattgaaagaggcaca
gctcgtctccaggctgcagtggtgctgaatcctcgttacccagaaatctctcccctcttc
tcactctctctcagctggaagggagagcgcagcggacgatctgatgacaaccttcgggcc
atggagagcgaggtgaacgtgttcaaaaatgaactgcagggtccacggccaggctatcag
ctcttgaccaatcagatttcacgcctgtgtgtctgtctggatgtctacctggagaccgaa
gaacaggatgatggcgtggaaggaccacgcgagtttccccgagaaaagatgtgcctgcgt
actgtgaagggtccaaatcgtctgaagccattcaaatacaaccatcctctgggcctcttc
agtcatcgctaa
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