Phycodurus eques (leafy seadragon): 133400363
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Entry
133400363 CDS
T09682
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pee
Phycodurus eques (leafy seadragon)
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pee03019
]
133400363
03041 Spliceosome [BR:
pee03041
]
133400363
Messenger RNA biogenesis [BR:
pee03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
133400363
Spliceosome [BR:
pee03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133400363
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Calcipressin
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
133400363
NCBI-ProteinID:
XP_061528898
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All DBs
Position
3:26417203..26443654
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AA seq
388 aa
AA seq
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MMDDDQPKTLYVGNLSRDVTEPLILQVFAQIGPCKSCKMIFDTAGNDPYCFVEFFDHRHA
AASLAAMNGRKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFGPFG
RISDARVVKDMTTGKSKGYGFVSFFNKWEAENAIQQMGGQWLGGRQIRTNWATRKPPGPK
TSYETGNSKHLSFDEVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGQIMEIRVFPDK
GYSFVRFSSHESAAHAIVSVNGTALEGHIVKCYWGKENPDMMNPVQQIPVPQQNKMSFPA
AQPYNQWGQWYGNGPQINQYVPNGWQVPTYSVYGQAWNQQGFNHLPANAGWTGMSAISNG
GVMEPTQGLNGSMLANQPGMGATGYPTH
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgacgaccaacctaaaacattgtatgtggggaatttgtccagggatgtaaca
gagcccctgattctgcaggtcttcgcacagataggaccctgcaaaagctgtaaaatgatt
tttgatacagctggcaatgatccatactgctttgtggagttctttgaccacaggcatgct
gctgcctcattggcagccatgaatggaaggaaaataatgggtaaggaagtcaaagtcaac
tgggccactacgccaacaagccagaaaaaagacaccagtaatcactttcatgttttcgtt
ggagacctcagcccagaaataactacagaagacgttaaagctgcctttgggccttttggc
agaatatcagatgcacgtgttgtgaaagatatgactacagggaaatctaaaggctatggc
tttgtgtctttcttcaacaaatgggaagcggagaacgccattcagcagatggggggccag
tggttaggaggcaggcaaatccgaactaactgggccacaagaaagccccctgggccaaag
accagctatgaaacaggtaactccaagcacctgtcctttgatgaagtagtaaaccagtcc
agccccagtaattgcactgtctactgtggtggcgtcagcacaggactgacagaacaacta
atgagacagaccttttctccttttgggcaaattatggaaatcagagttttcccagataaa
ggctattcgtttgtaaggttcagctcccatgagtcagcagcccatgccattgtgtctgtg
aatgggactgcattagagggccacatagtcaagtgctactggggtaaagagaacccagac
atgatgaacccggtgcagcaaatccctgtgcctcagcaaaacaagatgagcttccctgct
gctcagccctataaccagtggggccagtggtatggcaatgggcctcagatcaaccagtat
gtcccgaatgggtggcaggttcccacctacagtgtctatggtcaggcctggaaccagcag
ggcttcaatcacttaccggccaatgctgggtggactggcatgagcgccatcagtaacggt
ggggttatggagcccacacagggattgaatgggagtatgctagccaaccagcctggtatg
ggagccacaggataccccacacactga
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