Phycodurus eques (leafy seadragon): 133401263
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Entry
133401263 CDS
T09682
Symbol
rorc
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
pee
Phycodurus eques (leafy seadragon)
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pee03000
]
133401263 (rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pee03310
]
133401263 (rorc)
Transcription factors [BR:
pee03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
133401263 (rorc)
Nuclear receptors [BR:
pee03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
133401263 (rorc)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
133401263
NCBI-ProteinID:
XP_061529984
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Position
4:complement(12901277..12941945)
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AA seq
507 aa
AA seq
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MAVAGRLSLATRNASLATPSTATSSKITTQIEVIPCKICGDKSSGVHYGVITCEGCKGFF
RRSQLPTVSYSCSRQSNCTIDRSSRNRCQHCRLQKCLAQGMSRDAVKFGRMSKRQRDSLI
AEVERHRQQQQQQQLQVDAQSGLAYHTKEREDCSPQLLQPMTPAYCSGESELLSFTSDVH
PYLLCTPNQPQVSDMIYRSSGVSPSSRAHMRGDTSGHSEIRVGFNSRQHSHDPMAIHPYN
PPEDPRGPYPSSLRNIDELCDSIVRSNKDTCQYRAEELQALKWKVFSREEMQAYQSKSVD
EMWQHCAVRLTDAVQYVVEFAKHIPGFRLLSQNDQIALLKTGSMEVVLVRMSRVFNAENN
TVFFDGKFAGTEVFKSLACGDLIAAVFDFAHSVCALKLTDQQVALFSALVLINADRPCLE
DRGKVLCVQRSVELGLTHILHRDNRDSLMHKLYQRMSVLRSLCSLHTEKLRWFSQRYPLT
AHCLFPPLYKELFASEAELMLLPGATH
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggccggacgactgtcgctggcaacaaggaacgcaagcctcgccactccatcc
accgcaacctcatcaaaaatcacaacccagattgaagttatcccttgcaagatctgtggt
gataagtcctctggagtgcattatggagtcatcacatgtgaaggttgcaagggatttttt
cggcgtagccagctgcctacagtgtcctactcctgttccaggcagagtaactgtaccatc
gacaggtccagccgcaaccgctgccaacactgccgtctgcagaagtgcttggcccagggc
atgagcagagacgctgttaagtttggtcggatgtccaaacgccagcgggactctctgatc
gctgaagtggagcggcatcgacagcagcagcagcagcagcagctccaagtagatgcccag
tcaggcttggcctaccacaccaaggagcgcgaagactgctccccgcagctccttcagccc
atgacgccagcctactgctctggggaatctgagctgctgtccttcacttctgatgttcat
ccctacctgctgtgcactcccaaccagccacaagtgtccgatatgatctacagaagctct
ggcgtctcaccctcatctagagcccacatgaggggggacaccagtggacattctgagatt
agagtaggattcaattccagacagcactcacatgacccgatggcgattcatccctacaat
ccaccagaggatcctcgtggcccctatccttcctctctgcgtaatatagatgaactatgt
gacagcatcgtccgctccaacaaagacacctgccagtatcgagcggaggagctgcaggcg
ctcaagtggaaggtgttcagcagagaggagatgcaagcctaccagagcaaatcagtggat
gagatgtggcagcactgcgccgttaggctgactgatgccgtacagtatgtggtggagttt
gcaaaacacatccccggattccgtctgctcagtcagaacgaccagatcgcccttctcaag
actggttctatggaggttgttctggtgaggatgagtcgcgtcttcaacgcagagaacaac
accgtcttctttgatggcaaatttgctggaactgaagtcttcaagtctttggcgtgtggc
gacttaatagcggcggtgttcgactttgctcacagtgtgtgtgctttaaagctcaccgat
cagcaggtggccctcttcagtgcactggtcttgatcaatgcagatcgtccatgtctggag
gacagaggcaaggtactgtgcgtgcagagaagcgtggagttaggtctcacacacattcta
cacagagacaaccgggacagtctaatgcacaagctgtaccaaaggatgtccgtgttgcgt
tcactgtgcagtctgcacacggagaagcttcgctggttcagtcagcgctacccgctgacc
gcccactgtcttttccctccgctctacaaggagctgtttgcttctgaggcagagttgatg
ttgctgcctggagccacacactga
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