KEGG   Phycodurus eques (leafy seadragon): 133401398
Entry
133401398         CDS       T09682                                 
Symbol
mdc1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
pee  Phycodurus eques (leafy seadragon)
Brite
KEGG Orthology (KO) [BR:pee00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pee03400]
    133401398 (mdc1)
DNA repair and recombination proteins [BR:pee03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    133401398 (mdc1)
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 FHA BRCT
Other DBs
NCBI-GeneID: 133401398
NCBI-ProteinID: XP_061530338
LinkDB
Position
4:complement(18408146..18434441)
AA seq 1959 aa
MDATQVINDSILETDEEENEEVKTNKGRQPLAKLCILKNEHVPEREFPLFMGDNVLGRDI
GTCTLPLPAPCVSKQHATICISVHRRRGSRSGVDMEALVWDLGSMNGTRKGRLKLTPNVR
YALSEGDRLVMADIPCQYVSISDTREDVVGGTSDVRSSFPGDSVEESDSIKVSASKVSQA
SATVSCLGEEEKKPAPNSCVSFEATSVQLHGTVVPDSESDSDGEGPRHRESRCKVLGSDS
DSHKATPTCSTFLSPTNKIVPESPYCVDESPITPSSSTREKPHGHVSVSKKEPDVVVGRQ
HKKNTLEILDDSDEDKAGAVEKGQTPGRATLEEREHSVLEQLKSKASFTEEELSQLSTST
VSTLAIPKFNMDSDTDMEEDGGKAELVPDRRANAACFHMDSDTDVDEEGDTSSPPVHPDG
PVSHMSADAKKADAAPPVLPDDFQLDSNTDVDEEAGGTTWDKTPSRLHLIGEISKSDDNQ
APVFNTHVNVSDSAMISNDSNAVRDPPHLSPVATTPSSVTPGITAAAVQSDSDADTDVDE
SSAPPADGESDTDVDEEKNPIILPGIKPSCLQAPNLQHCSTPVQLSEREVEEMETQAFLS
PSLGPFKHKLDYFHIADGFNSAVRSAALSSCSDSQEEEEDFIVAETQSFILQTRGQVQSG
LHDARQASGCESSSEDMEELPSGGVSLQLGLSDSSHLESAGQALAMESTQAFVSVTEADT
QAYANISSADPESLGNDLNMEATQPNEVLARSPVLLEVQQVNLALQETQPYILEPYSESE
EDPGEDTETQPFDLPTSSTLALAETQLMTAIHEEERPTTNSLTHFQPNQIAKETDLSSYS
LADNCQLTSIAATQPMATSESEQCYEDSIPVLRNGKVQLNEENQPNANSYDLAANHQPLS
IAVTKPTAASKNEETDAKNVIEVTCESKVQLNKEKQPDMSAYALAVATQPMAISEHEECA
GEDLIPVLHEVKVQINNKTLPNTSSYSLAVATQPIAATQPLATSENEESDDEDLIPVFCE
RKVQLDKETQPNTSSYSLATNHQSTSIAPTQPLAASENEETDVEDLIEVLHASKVQLDKE
MQPNASSNILAITPHVVNIVVTKPIATSENEESDEEDDSIPLVRNKRKARPLQINEESQS
LSSTLEIPKESFNGKNHSKYRAEGQGSSNESPLVTSIQPDQEETQPNLDTLPNDDKDESG
PAQEKIETQTLVNFEVSSAETQLMDTCEDEEADSEILVPGLRKRKAKPLQIEDETQSLVC
SQVEETETSAVEQKPMSTSEPGPQALHSQSKVRTSTTKHSRRTPSLLREKEEPIEKRQAI
GNKARGSVGLLGSKSEDDAMRQQTNLFEVQNREQERRRNEIAQKEREETEGADEQKGRER
LETEAKDRQKQDQAEKERQQNKEEKPRATHRGQRVARRTIAVIPAPDQDDVPAKRTRSRS
NSSNSVSSEVSASSTQGSQGRGQGLKRSNGPNQAPITRRRTVAAGLTEQSEQGSCGAPSP
GALLRSSSPNALASEMSCSSSLVSQRGRGGRRGGGRAKTEPGTNFIPPIFSQNLAPKATP
QGKRAREPELLTTKLFDEAEKEKPESKQAAATRGRRRANVKEPSNNSAAESPLPKRNIRA
RVQRTVKSETSEALIAPPGSHEGVVKDKRKGRKRVLEAKVKDENPVPVQAKRRARASCLQ
RGRNAKESPPVTAIEDGSAASGGPGKSAQPQMPISSKRKPREASIDSSPMTCNSYASPLL
SRRSRDGSHSYKVLFTGVVDDAGERVLARLGGVLANGVADMNCLVTDKVRRTVKFLCAVA
KGIPIVNTHWLDKSGEAGSFLSPDAYIVKDPAQEKKFNFRLQESLRLASSQPLLQGYAIH
ITKSVKPEPVYMKDIISCSGATFLPKMPSSRKPHTMVISCTEDWPLCLAAVSASLPVVSA
EFILAGILQHKLDFETHKLSGPLSHLQPAGGRRPGRKKT
NT seq 5880 nt   +upstreamnt  +downstreamnt
atggacgccactcaagtcatcaacgactccatcttagagacagatgaggaggaaaatgaa
gaagtgaagacaaacaaggggcggcaacctttagccaagctgtgcatcttgaagaatgaa
cacgttcctgaaagagaatttcctctttttatgggggataacgtgcttggtcgtgacatt
ggcacctgcacgctgcccctgccggcgccctgcgtgtccaaacagcatgccaccatctgc
atctccgtccaccgcagacgaggatcccgcagcggggtggatatggaggctttggtttgg
gacttgggcagcatgaatggcacccgcaagggccgcctgaagttgactcccaacgtccgt
tatgcactcagcgagggggaccgtctggtcatggcagacatcccgtgtcagtacgtcagc
atcagcgacacacgcgaggacgtcgtgggcggaacgtcagatgttcgttccagttttccg
ggtgattctgtagaggagagcgatagcatcaaggtgagtgccagcaaggtgtcacaggct
tcagctacggtgtcatgtttgggtgaagaagagaagaagcctgcaccgaacagctgtgtg
tcctttgaggccacttcagtccagctgcacgggacggtggtcccagactccgaatcagac
tctgacggggaggggccaaggcacagagagagcaggtgcaaggttctagggtctgattcc
gactcacataaagccacccctacctgttcaacctttcttagcccgaccaacaagatagtc
cctgaaagtccctactgtgtggatgaaagccccatcacgccgtcctcgtctaccagagag
aagcctcacggacatgtcagcgtcagcaaaaaggagcctgacgtggttgttgggcgacag
cacaaaaagaacactcttgagattctagatgacagtgacgaggacaaggcaggcgcagtg
gaaaagggccagacaccggggagggccacgctcgaggagagggagcacagtgtgctcgaa
cagctgaaaagcaaagccagctttacagaggaggagttgtcgcaactgtccacaagcacc
gtctccacacttgccatccctaaatttaacatggacagtgacactgacatggaggaggat
ggtggcaaggctgaattggtgccagaccggagggcgaacgctgcatgctttcacatggac
agtgatacagatgtggatgaagagggcgacacatcctcacctcctgtacaccccgacggg
cctgtcagtcacatgtcagccgatgctaaaaaagctgatgcggcacctccagtcctgcca
gatgacttccagctcgacagcaacacagatgtggacgaggaggctggcggcaccacctgg
gataagacaccttccaggctacacttgattggggagatttcgaaatcagatgacaaccaa
gcccccgtttttaatacacacgtgaatgtcagtgattcagctatgatatcaaatgacagc
aatgcggtgcgagatcctcctcacttgtcacctgtcgccaccacaccctcctcagttact
cctggtatcaccgcagcagctgtccagtcggactctgacgcagacaccgacgtggatgag
tccagtgcgccccctgctgacggggagagtgatacagatgttgatgaagagaagaatcca
ataattcttccagggataaaaccatcttgtttgcaggctccaaatttgcagcactgctct
acccctgtgcaactatcagaaagagaagtagaggagatggagacccaagctttcctcagt
ccctctctgggtccgtttaaacataagttagactattttcacattgcagatggattcaac
agtgcagtaagatctgcagccttgtcttcatgctcagacagccaggaggaagaggaggac
tttattgttgctgagacgcagtcctttatccttcagacacgagggcaggtccaaagtggc
ctccatgatgccagacaagcctcagggtgtgaatcatccagcgaggacatggaagagctg
cctagcggaggagtgtctttacagctggggttgtctgacagtagccacctggagagtgca
ggccaggctctggcgatggagagcacccaggcctttgtctctgtaactgaggctgatacc
caagcatatgcaaatatttcaagcgcagacccagaatcacttgggaatgacttaaacatg
gaggccacccagcccaatgaggtgcttgccaggagtccagtgttgcttgaggtgcagcag
gtaaatttggctttacaggaaacacagccctatattttggagccctacagtgagtctgaa
gaagacccaggggaagatacagagacccaaccttttgacttgcccacctcttcaaccctt
gctttggctgaaacccaactcatgactgcaattcatgaagaggagcgcccgactacaaac
agtctcacccattttcaaccaaaccagattgctaaagaaactgatttgagttcttacagt
ttggctgataattgtcagcttacaagtattgcggcgacccaacctatggctacaagtgaa
agtgaacaatgttatgaggactcgattccagtcttgcgtaacgggaaggtacagcttaat
gaagagaatcaaccaaatgcaaattcttatgatttagctgctaatcatcagcctttgagt
atagctgtaaccaagcccacggctgcaagtaaaaatgaggaaactgatgccaaaaacgtg
attgaagtcacatgtgaaagtaaagtgcagcttaataaagagaaacaacccgatatgagt
gcttatgctttggctgttgcaacccaacctatggcgataagtgaacatgaggaatgcgct
ggtgaggacttgattccagtattacatgaagtaaaagtgcagataaataacaagacttta
cccaatacaagttcttacagtttggctgttgcaacccagcctatagctgccacacagcct
ttggctacaagtgaaaatgaagaaagcgatgatgaggacttgattccagtcttttgtgaa
agaaaagtacagcttgataaagagacgcaacccaatacaagttcttacagtttagctact
aatcatcagtctacgagtatagccccgacccagcccttggctgcaagtgaaaatgaggaa
actgatgtcgaagacttaattgaagtcttgcatgcaagtaaggtgcagcttgataaagag
atgcaacccaatgcaagttctaacattttggccattacacctcatgttgttaatatagtt
gtgaccaaacctattgctacaagtgaaaatgaggaaagcgatgaagaggacgactcaatt
ccactcgtgcgcaataaaagaaaagcaaggccgctacaaataaatgaggagtcacagtcc
ctcagcagtactcttgaaatcccaaaagaaagttttaatggtaaaaatcattcaaagtac
agagctgaaggccaagggagcagtaatgaatctccattagtaacttcaatacaaccagat
caagaggagactcagcctaatcttgacaccctgcctaacgatgacaaagatgaatcaggt
cctgctcaagagaaaatagagactcagacgcttgtgaattttgaagtctcttctgctgaa
actcagctcatggacacatgtgaagatgaagaggctgacagcgagatcttggtccctggc
ctgaggaaaagaaaagccaaaccactgcaaattgaagacgagacacagtcactcgtatgt
tctcaagtggaggagaccgagacctctgcagttgaacaaaagccaatgagtactagtgaa
ccgggcccacaggctctacacagtcaatctaaagttagaaccagtaccactaaacactca
agaagaacaccttcactactaagagaaaaggaggaaccaatagaaaaaagacaagcaatt
ggcaataaagccagaggaagtgtaggcctgctggggagcaagagtgaagatgatgctatg
aggcagcagaccaacctttttgaggtccaaaatagggagcaagagagacgacgaaacgaa
attgcacagaaggaaagagaagaaacagaaggggcggacgaacaaaaaggacgtgagaga
ctggaaacagaagctaaagatagacagaaacaggatcaagcagagaaagaacgtcaacaa
aacaaagaagaaaaaccccgggcgacacacagaggccaaagggtggccagaagaaccatc
gccgttatacccgctccagatcaagatgatgtcccagccaagaggactagatcccgctcc
aactcatccaactccgtcagctccgaagtgtccgcttcaagcactcaagggagtcagggg
cgaggccaagggctgaaaaggtccaacgggcctaaccaggcacccatcacgaggaggcgg
acagtggcagctggtctcacagaacaatcagagcagggcagttgcggagctccgtcccca
ggagcacttttgagatccagctcacccaacgcccttgcttcggagatgtcctgcagcagc
agcctcgtctctcagagaggaagaggagggagacgaggaggaggaagggccaaaacggaa
cccgggaccaactttatcccccccatattcagtcagaatcttgctcctaaggctacgcca
caaggcaagagggccagggagccagagctgttaaccactaagctttttgatgaagctgag
aaggagaagccagagtcaaaacaggcagctgccactagggggaggaggcgagcaaatgta
aaagaaccctcgaacaactccgctgctgaatctcctctgcctaaaagaaatatcagggcc
agagtgcagaggacggtaaaaagtgaaacttctgaggctctaatagctcccccaggcagc
catgaaggtgtggtcaaagacaagaggaaaggaaggaagagggtgttggaggcaaaagtg
aaagatgagaacccagttccggtccaagcaaagagaagagctagggcgtcctgccttcag
cggggcaggaatgctaaggaatctcctcctgtcacagccattgaggatggaagtgcagca
tctggcggtcctggcaaaagtgcacagcctcagatgccaatcagcagcaagaggaaaccg
cgagaagcttccatagattcctctcccatgacttgcaactcttacgcttccccattactg
agtcgccggtcacgagatggcagccactcttacaaggtgctgttcacgggggtggtggac
gatgccggggagagagtgctggcccgtttgggaggcgttttggctaatggcgtcgcagac
atgaactgccttgtgaccgacaaggtgcgcaggactgtcaagtttttgtgtgcggtggcc
aaaggaatccccattgtcaacacacactggctggacaagagcggtgaagccgggagcttt
ctgtctcctgacgcctacatcgtgaaagatccagcacaggagaaaaagttcaattttcgc
ctgcaggagtctctgaggctcgccagcagccagcctcttttacagggctatgcgatccac
atcaccaagtcggtgaagcccgagccggtctacatgaaggacataatttcctgcagcgga
gccacctttctcccgaagatgccttcttcacgcaagcctcacaccatggtgatctcctgc
acggaggactggccgctgtgccttgcggccgtctctgcgtcgctcccggttgtctcggcc
gagttcatcctcgctgggatcctgcagcacaaactggacttcgaaacccataaactgtcc
ggcccgctgagccatctgcaacctgccggcggcagaaggccgggcaggaagaagacttag

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