Phycodurus eques (leafy seadragon): 133401488
Help
Entry
133401488 CDS
T09682
Symbol
cnot3a
Name
(RefSeq) CCR4-NOT transcription complex subunit 3a isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133401488 (cnot3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pee03019
]
133401488 (cnot3a)
Messenger RNA biogenesis [BR:
pee03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133401488 (cnot3a)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
133401488 (cnot3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
133401488
NCBI-ProteinID:
XP_061530523
LinkDB
All DBs
Position
4:complement(20500973..20521401)
Genome browser
AA seq
908 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQRE
KEETGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIDELKRLIERHRFHI
RMLETILRMLDNDSVPVDAIQKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEDIPAALVA
TSPSGQGNMEDEMYLHSSSTPTSTTSSSPIPPSPATCAAENSEDDKKRGRSTDSEVSQSP
VKNGTPSLLSSFSSSTTSGSSSSSSLVSMASVVGGVPVVPTSSGLIGSFSSAVQQHQHQH
LPAQQQQQQPQPQNQSQQQQPPLSKPSAPSNSNPSPPNNLLLPASTTPSLPTPSTPISSA
ASSLSQPSSGSTPVSSLGLGIGLGLGKGGITGTSSANQMSAFGLGVHSTSLSTMAGLISG
STPAPYAQAAAGGLGLSSSSTPSSISVESSTSIITTSGSSGVTTNGAATALGLLGSSTGH
GSLSGSILGLVSGQNASPAASQVPPSSVSASPGVVGMMGGNGGSVGMVGGVSTAPTRPPS
GLKQNGSTSYSAVVAESSTESALSTPSQSQSSQPSSLSSSTSQPLDNGPSLISSITLPPS
SPSPSFSDSTPGGGNLLNGPHSYTQASEGLKAPEPLISLKAMAERAALGSGLDGDIPNLH
LTERDIFSSSTAPVTPAAPQPSVSEVSIPPSLGVCPLGPTPLPKDQLYQQAMQESAWTHM
PHPSDSERIRQYLMRNPCPTLPFHYQMPPHHSDSIEFYQRLSTETLFFIFYYLEGTKAQY
LSAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYR
YLEDRDLQ
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagagaaaacttcaaggtgagattgacagatgcttgaaaaaagtagcggaa
ggcgtagaacagtttgaagacatttggcaaaagcttcacaatgcagccaatgcgaaccag
aaggaaaaatatgaagctgacctcaagaaagagattaaaaaattacagcgattgagggat
cagataaaaacatgggtggcctccaatgagatcaaagacaaacggcagctagtcgagaac
cgcaagctcatagaaacgcaaatggagcggttcaaagtggtggaacgggaaacaaaaaca
aaagcctactccaaagaagggttggggcttgctcagaaagtggatccagctcagagggaa
aaggaggagacgggacagtggctaacaaatacgatagacactctaaatatgcaggtcgat
cagtttgaaagcgaggtggagtctctttcggttcaaacaagaaagaagaaaggtgataaa
gagaagcaagatcgcattgacgagctcaagcgcttgatcgagaggcaccggtttcacatt
cgcatgttggagacgattttgcgtatgctggacaacgactctgtgccggtggacgccatt
cagaagatcaaagatgacgtggagtactacattgattcttcacaagacccagactttgaa
gagaatgagttcttgtacgacgacttagacctcgaagacatccctgcagcattagtggcc
acgtctccatcgggtcagggaaacatggaagatgagatgtacctccactcgagcagcact
cccacttccaccacttcgtcgtcacccatccccccatcgccggccacctgcgctgctgag
aactcagaggacgataagaaaaggggacgttcaacagacagtgaagttagtcagtcacct
gttaaaaacggcacaccctccctgctctcctccttctcttcatccaccacgtccggctcc
tcctcatcctcctccctggtgtccatggcgagtgtggtcggaggcgtacctgtggttccg
accagcagcggcctaataggaagcttcagcagcgccgtgcaacagcatcagcatcagcat
ctgcctgcgcagcagcagcagcaacagcctcagccacagaaccaatcgcagcagcagcaa
ccgcctctgtccaaaccctcggccccctcaaacagcaaccctagtccgcccaacaacctg
ctgctcccagcatccaccaccccatctctgcccacacccagcacgcccatttcatcagct
gccagttccctgtctcagccttcgtccgggtccacccctgtgtccagcttgggactgggg
attggcctgggcttaggcaaaggtggcattacagggaccagcagtgccaaccagatgtcg
gctttcggcttgggggtccactccacgtccctaagcacgatggcggggctcatttcaggg
tcaacgcccgccccttacgcgcaggcggcagcagggggcttgggcctgagcagcagcagc
acgccatccagcatttcagtggaaagcagcacttccatcatcaccacatccggctccagt
ggagtcaccaccaacggggcggccacggcactcgggctgctcggctctagcaccggccac
ggctcgctgagcggcagtattctgggcctggtgtccgggcagaacgcgtcgcccgccgca
tctcaggtgccccccagttccgtcagcgcttctcccggagtggtcggcatgatggggggt
aacggcggaagtgtcgggatggtcggaggtgtgagcactgcgcccacacgaccacccagc
ggactcaagcagaatggaagcacaagttacagtgccgtagtggctgaaagttccacagaa
tcagctctcagcacaccgagccagtctcaaagcagccagccatcatccctcagttcatca
accagtcagccgttggacaacggccccagtttaatcagctccatcaccctgccccccagc
tcgccgtcgccctcattttcggacagcacacccggcggaggaaacctcctcaacgggccc
cactcctacacacaggcttcagagggcctcaaggctccagagcctcttatctccttgaag
gccatggcggagagggcggccctgggatcgggtcttgacggagatatcccaaacctgcac
ctaacggaaagagacatcttctcgtcgtcaacggcgcccgtcaccccagccgccccgcag
ccatccgtatccgaggtcagcatcccaccgtcgcttggcgtctgtccgttggggcccacc
cccctccccaaagaccagctgtaccagcaggccatgcaagagtcggcgtggacgcacatg
ccgcacccgtccgactctgagaggatcaggcaatacctgatgaggaacccgtgccccacc
ttgcccttccattatcagatgcctccgcaccactcagactccatagagttctaccagcga
ctgtccacagaaacactgttttttatcttctactacctggagggcaccaaggctcagtat
ctgtccgccaaggcgctgaagaagcagtcatggaggtttcacaccaagtacatgatgtgg
ttccagaggcacgaggagcccaagactatcactgatgaatttgaacagggcacttacatt
tactttgactatgagaaatggggccagcggaagaaggagggcttcacgttcgagtacagg
tacctggaagaccgagacttgcagtga
DBGET
integrated database retrieval system
