Phycodurus eques (leafy seadragon): 133401622
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Entry
133401622 CDS
T09682
Symbol
dhx16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133401622 (dhx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pee03041
]
133401622 (dhx16)
Enzymes [BR:
pee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
133401622 (dhx16)
Spliceosome [BR:
pee03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
133401622 (dhx16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
PWI
nSTAND3
Motif
Other DBs
NCBI-GeneID:
133401622
NCBI-ProteinID:
XP_061530808
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All DBs
Position
4:25768380..25788836
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AA seq
1056 aa
AA seq
DB search
MANLEQWVNDRLHDILGLSDRYVAQFMIGTARRATSSQDFVARLQQTGTIDIDQSVTAFA
HELFDKIPRKQVVEKASRVMERQAIEMDRKNRTYTLLEDSDSPEDAVVEKQRGIKKKSKD
KDRGSKRKNIRRKKESESSSEEDVPVRAKLSQGDNVPVKKEDEEEEEWEKEERERLQDIE
ERDAFAERVKLRDKDKTRNIAERTDKKAYEEAQKRLKLAEDDQRNMLPELRKQSRREYLK
KREEEKLEDLEAEIIDEEYLFATDELTEHEKKDLEYKCTLRDLAKDYKKAGAKEQEERKN
RYYMPEEIRRKEVPQKELELEEEAPMELGGEQGRWEEERLKTASLSFGAKKEREQGVRRQ
QEKYQLIVEEDEMIDFVSTAITMKGTLTEKDNETPALSQSELKKLSMQEVRRSLPIFPYR
EDLLAAIHEHQVMIIEGETGSGKTTQIPQYLLEDGFTKGGMKIGCTQPRRVAAMSVAARV
AQEMSVKLGNEVGYSIRFEDCTSERTVIKYMTDGMLLREFLTEPDLASYSVILIDEAHER
TLHTDILFGLIKDIARFRPDLKVLVASATLDTERFSTFFDDAPVFRIPGRRFPVDIFYTK
APEADYMEACVVSVLQIHVTQPPGDVLVFLTGQEDIETCCEQLQDRCRRLGSKIAELLVL
PIYANLPSDMQAKIFSPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKNYIARTG
MESLIVMPCSRASANQRAGRAGRVAAGKCFRLYTAWAFKHEMEEMTVPEIQRTNLGNVVL
LLKSLGINDLLHFDFMDPPPHETLLMALEQLYALGALNHLGELTTLGRRMAELPVDPMLS
KMILASEQYKCSEEVLSIAAMLSVNNSIFYRPKDKAVHADNARMNFVVPGGDHLVLLNVY
TQWVESGYSTQWCYENFIQFRSMRRARDVRDQLEGLMERIEVEMVSSQGDAMPIRKAVTA
GYFYHTARLSKGGYRTVKHQQTVYIHPSSSLFEEQPRWLIYHELVMTTKEFMRQVVEIES
GWLLEVAPHYYKSKEVEDSSSKKMPRKQGKAKEELG
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggccaacttggagcagtgggtgaatgacaggctccacgacattctgggcctgagcgat
cgatacgtggcccagtttatgatcggcactgcccgcagggcgaccagctcccaggatttt
gtggcgcgtctccagcagacgggcaccattgacatcgaccagagtgtcaccgctttcgcg
cacgagctttttgacaagattcctcgcaagcaggtcgtggagaaagcctcgcgggtgatg
gagcgtcaggccattgagatggacaggaaaaatcgcacatacactttgctggaagacagc
gacagccctgaggacgctgttgtagagaagcaacgcgggataaagaagaagagcaaagac
aaggacagggggagcaagaggaagaacatccggcggaagaaggagagcgagtcatccagt
gaggaagacgttcctgtcagggctaagttgagccaaggtgacaacgtgcccgtcaagaaa
gaggatgaggaagaagaggagtgggagaaggaggagcgggagcgactgcaggacattgag
gaacgtgacgcctttgctgagcgcgtcaagctgagggacaaagacaagacgcgaaacatc
gcggagagaacggacaaaaaggcttacgaggaggctcagaagaggcttaagttggccgaa
gatgatcagaggaacatgttgcctgagctgaggaagcagtcccgccgcgaatacctgaag
aagcgtgaggaggagaagctggaggatctggaggcggagatcatagacgaggagtacctg
tttgccactgatgagctgacggagcacgagaagaaggacctggagtacaagtgcacgctg
cgagacctggccaaggactacaaaaaggctggagccaaggagcaggaggagaggaagaac
agatactacatgccagaggagatcaggagaaaggaggtgccccagaaggagctggagctg
gaggaggaggcgcccatggagctgggcggcgagcagggtcgctgggaggaggagcggctc
aagactgcctcgctcagcttcggtgccaagaaggagcgcgaacagggcgtgaggcgccaa
caggagaagtaccagctcatcgtggaggaggacgagatgatcgactttgtcagcactgcc
atcaccatgaagggaacgctaacggagaaggacaatgagactccagcgttgtcccagtca
gagctgaagaagctgtccatgcaggaggtccgccgcagcctccccattttcccttaccga
gaggatctgctcgccgccatccacgagcaccaagtgatgatcatcgagggtgagacgggc
tcaggaaagaccacccagataccgcagtacctcctggaggatggtttcactaaaggaggg
atgaagatcggatgcacgcagcctcgcagagtggccgccatgtcggtggctgcccgggtg
gcgcaggaaatgagcgttaagcttggtaatgaggtgggatacagtatccggtttgaggac
tgcacgtctgagagaacagtgatcaaatatatgacggacgggatgttgctgcgagagttt
ctcacagagcccgacctcgccagttacagtgtgatactcattgacgaggcacacgagcga
accctccacacggacatccttttcggcctgatcaaagacatcgctaggttccgacccgac
ctgaaggtgctggtggccagcgccacactggacacggagcgcttctccacattctttgac
gatgcgcccgtcttcaggatccccggcaggagattccccgtagacatattctacacaaaa
gctccagaggcggactacatggaagcgtgtgtggtgtcagtgctacagatccacgtcaca
cagcctcctggagatgttctagtctttctcaccggacaggaggatattgagacttgttgt
gagcagctccaagacagatgtcggcgactcggctccaagattgctgaacttctcgtcctg
cctatctacgctaatctgccctcggacatgcaggccaagatcttcagccccacgccgccc
ggcgcacgcaaggtggtggtggcaaccaatatagcagaaacctcgctgaccattgatggc
atcatctacgtcatcgaccccggcttctgcaagcagaagaattacatcgcccgtaccggg
atggagtcgctcatcgtcatgccctgctctcgggcgtcggctaatcagagagcgggccgt
gctggcagagtggctgctggcaaatgcttcaggctctacacggcgtgggccttcaagcac
gagatggaagagatgactgtgcctgagattcagaggaccaacctaggaaatgtagttttg
ctgctcaagagtttagggatcaacgacctcctccactttgacttcatggacccgccacca
catgagacgctattgatggctctggagcagctttatgcccttggagcactgaaccacctg
ggggagcttaccacgctgggtcgaaggatggccgagctgcccgtggaccccatgctgagc
aagatgatccttgcctctgagcagtacaagtgttctgaggaggttctgtctatcgccgcc
atgctgtctgtcaacaactccatcttctaccgacccaaggacaaggcggtgcacgccgac
aatgccagaatgaattttgtggtgcccggtggagaccacctggtgctcctaaacgtctac
acgcagtgggtggagagcggctactcgacgcagtggtgttacgagaacttcatccagttc
cgctccatgaggcgagcgcgggacgtgcgcgaccagctggagggcttgatggagcgcatt
gaggtggagatggtcagctcgcagggagacgccatgcccatccgcaaggcggtgacagcg
ggctacttctaccacacagcgcggctgagcaaaggtggctacaggacagttaagcatcag
cagacagtctacatccaccccagcagctcgctgtttgaggagcagccccgatggcttatc
taccacgagctggtcatgaccaccaaggagttcatgagacaggtggtggagatcgagagc
ggctggcttctggaagtggctcctcactactacaagagcaaggaggtggaggacagcagc
agcaagaagatgccccgcaagcagggcaaggccaaggaagagctgggctga
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integrated database retrieval system
