Phycodurus eques (leafy seadragon): 133402404
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Entry
133402404 CDS
T09682
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03022
Basal transcription factors
pee03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133402404 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
133402404 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pee03021
]
133402404 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
pee03400
]
133402404 (gtf2h1)
Transcription machinery [BR:
pee03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
133402404 (gtf2h1)
DNA repair and recombination proteins [BR:
pee03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
133402404 (gtf2h1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
133402404
NCBI-ProteinID:
XP_061532045
LinkDB
All DBs
Position
5:complement(28563013..28571285)
Genome browser
AA seq
547 aa
AA seq
DB search
MASLSEEVLLVLKKVRQKKQDGTLYLMAERVAWSAEGKDRFTVSHLYADIRCQKISPDGK
AKIQLQLVLHSGESTTFHFSNESTALKDREAAKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRGGLNQTDPAVCNNKQEVGISGAFLADIRPQTDGC
NGLRYNLTADIIESIFRTYPAVKQKYCESVPHNLTEKEFWTRFFQSQYFHRDRINTGTQD
IFTECAKLDEKGLKSMVVQGVKNPLVDLQSLEDKSLDEGYGVCTSLPSTSNSNKTVKESS
NYAIIKRFNHHSAMVLAAGSRKGENDQGSETSSTDGNSRDSDLFQPPIKKVKLQEAIEYE
DLQRENGPKVVALNLKKSDRYAHGPVPLQSLKYTTSQEIINSVNHIRHEMASYKPNLTRV
LTSAVASSATAALSPGGLLMQAGSQQAINQMVPSDIQGELKHIYIAAGELLRHFWSCFPV
NTPFLEEKLIKMKSNLERFQTTKLCPFQEKIQRQYLNKNLTAHLEQMLQAAYSKFHVWQT
RRMMRKT
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcctcactgtcagaagaggtgcttctggtgttgaaaaaggttcgccagaagaaacag
gatggcactctctatttgatggctgagcgcgtagcctggagtgcagagggcaaggaccgc
ttcaccgtcagccacctttatgcggacattcgctgtcagaagatcagccccgatggaaaa
gccaaaattcagctccaactggttcttcactccggcgagagtaccacattccacttttca
aatgaaagcactgcactcaaagaccgagaggctgccaaagagctgctgcaacagctcctg
cccaagttcaagaagaaagctaacaaagaactcgaggagaaaaacaggatgcttcaagaa
gatccggtgctttttcaattatataaagatttagtggtcagccaagtgatcagtgctgag
gaattctgggctaaccgaggaggactaaaccagacagacccagcagtgtgcaacaataag
caggaagttggtatatctggcgcttttttggcagacattcggcctcaaacagacggctgt
aacggcttgagatataatctgacagccgatatcattgaatctatcttcagaacctatcct
gcagtgaaacaaaagtattgtgaaagtgtgcctcacaacctgacggagaaggagttctgg
acacgcttcttccagtcgcagtattttcaccgagatcgcatcaatactggcacacaggac
attttcacagagtgtgccaagctggacgaaaaagggttaaagtcaatggtggtgcaagga
gtaaagaaccccctggttgacctgcagtcattagaagataaatccttggatgagggttac
ggtgtctgcacctcacttccctctacttccaattcaaacaaaacagttaaggagagcagc
aactacgccattataaagcgcttcaaccatcacagtgccatggtgctggcagcaggctca
cgcaagggggagaatgaccaaggtagtgagacgagcagcactgacggaaactcgcgggat
tcagacctctttcagcctcccatcaagaaggtgaaattacaagaagccatagagtatgaa
gatttgcaaagggaaaacggaccaaaagtggttgcattaaacctcaaaaagtcagacagg
tatgctcatggtcctgtgcctcttcagtccctaaagtacacaacgagccaagaaatcatc
aactccgtcaaccacatccggcatgagatggccagttacaaacccaacctaactcgggtt
ttgaccagcgcagtagcatcttccgccactgcagcactttctcccggcgggctcctcatg
caggcaggatcgcagcaagccataaatcagatggtaccgtctgacatccaaggggaactg
aagcatatatatatagctgctggggagttgttgagacacttctggtcctgttttcctgta
aacacaccatttttggaggagaagttgattaaaatgaagtccaacctcgaaagatttcag
acaaccaagctttgtccttttcaagagaagattcagcgtcagtacttaaataaaaacctc
acagcacacttggagcagatgttgcaggcggcgtacagcaagttccacgtctggcaaacg
cgtcgcatgatgaggaaaacctga
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