Phycodurus eques (leafy seadragon): 133402427
Help
Entry
133402427 CDS
T09682
Symbol
ighmbp2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
pee
Phycodurus eques (leafy seadragon)
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pee03009
]
133402427 (ighmbp2)
03012 Translation factors [BR:
pee03012
]
133402427 (ighmbp2)
Enzymes [BR:
pee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
133402427 (ighmbp2)
5.6.2.5 RNA 5'-3' helicase
133402427 (ighmbp2)
Ribosome biogenesis [BR:
pee03009
]
Eukaryotic type
Other ribosome biogenesis factors
133402427 (ighmbp2)
Translation factors [BR:
pee03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
133402427 (ighmbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
DEAD
Viral_helicase1
ResIII
nSTAND3
IstB_IS21
UvrD-helicase
AAA_16
AAA_22
SLFN-g3_helicase
Helicase_RecD
Flavi_DEAD
AAA_25
DnaB_C
Zot
AAA
ABC_tran
PhoH
NPHP3_N
ATPase
HEM4
AAA_28
SRP54
AAA_31
UvrD_C_2
UvrD_C
Motif
Other DBs
NCBI-GeneID:
133402427
NCBI-ProteinID:
XP_061532079
LinkDB
All DBs
Position
5:29065938..29079313
Genome browser
AA seq
990 aa
AA seq
DB search
MAVEKFVSTTLELLQEEREAEIEETRVWKENISHKELQNKGVCLLKLHIGSQSTGLYGRT
VVVFEPRKYLGFSCLPSNSFGPGDIVGLYDSGGCSGTSQISTGIVRRVHQASISVAFDDS
NDGLSFETEALYSLLKLTNDVTYKRMKRALYVLNGYSNGPSANLIGVLFGEAKPSSHSQP
QEVKFFNANLDPSQREAVTFALSQRELAVIHGPPGTGKTTTVVEIILQAIKQGQKVLCCA
PSNVAVDNLVERLARCKAKVLRLGHPARLLESIQKHSLDAILARSDNANIITDIRRDIDK
ALLGMKKKNEKGEHVNYRREVGELRKELKTREATAIAQILKSADVVLSTNTGACDDGPLK
FLTAEHFDWVVIDECAQSLESSCWISLLRARKCTLSGDYKQLPPTIKSHVAASKGLSLSL
MERLILMYGDSVVRMLTVQYRMNSAIMDWASKEMYQGRLTAHSSVEAHLLKDLPGVTCVE
ETSTPLLLIDTAGCGLTEMEIAEEQSKGNQGEVDIVALHIKALTEAGVNAKDIAVIAPYN
LQVDLLRQKLSARHPELEIKSVDGFQGREKEAVVLSLVRSNRKGAVGFLAEDRRINVAVT
RARRHVAIVCDTQTVQHHAFLKTLIHHVTECGDVRTAFEYLPDIVPQNYSRDHKDTKPCI
LTTQKVEGKKVKAVEKKTSGSNTRNGKKHDKPLKSCVSVLAEEEQIKNRQSEIREMVERF
LKNLSQSELDFPPSFNSHDRLLVHQIAEELGLVHQSKGEGKDRYITVSKHVNSKPDHPTA
RENKEDEQESDKSEGAAVSQEQDIPQPPSKESSCQPQLDLKSLHLERMNREQQKREENAQ
QKKQQNISVVTKKSTAIKGKKRTKAGACDIAASSSPGDDFDTLISAVVKADSVCSFVKCK
ASVLTLGQLCLFCNRQYCLSHHVPEVHGCGDQAKTQARMRISKEGILYAGSGTKEKSMDP
NKKAYLHRKLDSKLKDMATQRKTKNKEKDG
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggcagttgaaaaatttgtttcaacgacactggagcttctgcaagaagagagggaggct
gaaatagaggaaaccagggtgtggaaggagaacatatcgcacaaagaacttcagaacaaa
ggagtgtgcctgcttaaacttcacataggaagccagtccactggcctgtacggtcgaaca
gtagtagtcttcgagccaagaaagtatcttggcttctcatgtcttccgagcaatagcttt
ggacctggggatatagttgggttatatgactccggtggatgcagtgggacgtctcagatc
agcacaggcattgtgagacgagtccaccaggcctcaataagtgtggcttttgacgattca
aacgatgggctcagttttgagacagaggctttatatagcctcttaaagttgacaaatgat
gtgacttataagcgaatgaaaagggctttatatgtgttgaatggatacagcaacggaccg
tctgcaaatcttatcggtgttctctttggagaagccaaaccttcttcacattctcagcca
caggaggtcaaattctttaacgccaacctggatccttctcagagagaagcagtgactttt
gctctgtctcagcgagaactggcagtgattcatggtcctccaggcactgggaaaaccacc
acagtagtggagatcattctgcaagctatcaaacaaggccaaaaggtcttgtgctgtgcc
ccgtcgaatgtggcggtggataatttagttgagagattagcccggtgcaaggccaaagtt
ctgaggctcggtcaccctgccaggctgctggagtctatacaaaaacattcactggatgcc
atcctcgccagaagtgacaatgccaacatcatcaccgacattcgcagagacattgacaaa
gctcttctgggaatgaaaaagaagaatgaaaaaggagagcacgtgaactacaggagggaa
gtaggtgaactaagaaaagagctgaaaaccagggaagcaacggccatcgcccagattctt
aaaagcgccgatgttgtcttatcaaccaatacaggtgcatgtgatgacgggcctctgaaa
ttcctgacagctgagcattttgattgggtggtgattgatgagtgcgctcagtcactggag
agcagctgctggattagcctgctccgagcgcgcaagtgcactctgtccggagactacaag
cagttaccaccgaccatcaaatcacacgtggcagcttcaaagggcttgtctcttagtcta
atggagagactaatcctaatgtatggagactcagttgtgcgaatgctcacagtccagtac
cgcatgaacagtgccatcatggactgggcctccaaagaaatgtaccaaggaagactgacg
gcacacagctcagtggaagcacacttgttaaaagatctgcctggggtcacctgtgtcgaa
gaaaccagcacacctcttcttctcatcgacacagccggctgcggtctgacagaaatggag
atagcagaagagcaatccaaaggcaaccaaggtgaggtggacatcgtagctctgcacatt
aaagccttgactgaagctggggtgaatgccaaagacatagctgttattgctccttacaat
ttgcaagttgaccttttgcgtcagaaactttctgcaaggcatccagagctggaaatcaaa
tcagtggatggctttcaaggcagagagaaagaagctgtggttttgtctttagtccggtcc
aataggaaaggtgcagtgggttttctggcagaggacagaaggataaacgtggctgtcaca
cgtgcgagacgtcacgtcgccattgtgtgtgacacccagacagttcaacatcatgctttc
cttaagacactgatccatcatgtcactgagtgtggggatgtacgaacagcatttgagtac
ctaccagacattgtaccgcagaattacagccgtgaccacaaagacacaaagccttgcatt
ttgaccacacaaaaggttgagggaaagaaagtaaaagcagttgagaagaaaacaagtgga
agtaacacaagaaatggtaaaaaacatgacaaacccttaaagtcatgtgtatcagtgctc
gccgaggaggaacagattaagaaccgacaaagtgagatcagagagatggtggaaagattt
ctgaagaacctcagtcagagtgaactagactttccgccgtcattcaactcccatgaccgc
ctgttggtgcaccagatcgctgaagagctgggcctcgtgcaccagagtaaaggcgagggc
aaagacaggtatatcactgtctccaagcatgtgaactcaaaaccggatcacccaactgca
cgagagaataaggaagatgagcaggaaagtgacaaaagtgagggagctgcagtttctcag
gagcaggacattcctcaaccaccctcaaaagaatcatcatgtcaacctcaattagattta
aaaagtttacatttggagcgaatgaatagggaacagcagaaaagggaagaaaatgctcaa
caaaagaagcagcagaacatttcggttgttacaaagaagtccacagccattaaaggaaag
aagcgaaccaaagcaggcgcatgcgacattgcggcatcctcttctccgggcgacgacttt
gacaccctcatcagcgccgtggtgaaggcagacagcgtgtgcagttttgtcaagtgtaaa
gcctccgtgctaactcttggacagctttgtcttttctgcaacaggcaatattgtctcagt
caccacgtaccagaggttcacggctgtggagaccaagcaaagactcaggctcgaatgaga
ataagcaaggaggggattctttacgccggcagtgggacaaaagaaaaatccatggacccc
aataagaaagcttatctacacaggaaactggactctaaactcaaagatatggcaacacag
aggaaaacaaaaaacaaagagaaggatggttaa
DBGET
integrated database retrieval system
