Phycodurus eques (leafy seadragon): 133403295
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Entry
133403295 CDS
T09682
Symbol
roraa
Name
(RefSeq) nuclear receptor ROR-alpha A
KO
K08532
RAR-related orphan receptor alpha
Organism
pee
Phycodurus eques (leafy seadragon)
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pee03000
]
133403295 (roraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pee03310
]
133403295 (roraa)
Transcription factors [BR:
pee03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
133403295 (roraa)
Nuclear receptors [BR:
pee03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
133403295 (roraa)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
133403295
NCBI-ProteinID:
XP_061534088
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Position
5:complement(22330814..22386301)
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AA seq
468 aa
AA seq
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MMYFVISAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNC
LIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQ
PGEAEPLTPSYGLSANGLTELHDDLSGYMDGHTPDGTKPDSAVSSFYLDIQPSPDQSGLD
INGIKPEPICDFAPGSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREEL
QQMTWQAFLQEEVESYQSKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVL
LKAGSLEVVFVRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHL
SEDEIALFSAFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVS
TLRALCSRHTEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSMPVDG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgatgtattttgtgatttcagctatgaaagctcaaatcgaaataattccctgcaagatc
tgtggagacaaatcatcaggcatccattacggcgtgataacatgtgaaggctgtaagggc
ttcttcaggaggagtcagcagagcaatgcggcctactcctgcccccgtcagaagaactgc
ctgatcgaccgcaccagccgcaaccgctgccagcactgccggctgcagaagtgcctggcg
gtcggcatgtcacgagacgcggtgaagtttggccgcatgtccaagaagcagcgagacagc
ctctacgctgaggtccagaagcatcggctccagcagcagcagcgcgaccaccaacagcag
cccggggaggcggagcctctcacgcccagctacggcctctcggccaacggcctcacggag
ctccacgacgacctcagcggctacatggacggccacacccccgacggcaccaaaccggac
tcggccgtcagcagcttctacctggatatccagccctccccggaccagtctggcctggac
atcaacggcatcaagcccgaacccatctgcgactttgcccccggctctggcttcttccct
tattgctccttcaccaacggagaaacctcccctaccgtgtccatggcagaactagagcac
ttggcccaaaatatctccaaatcacacatggagacatgtcagtacctgagagaagaactt
cagcagatgacctggcaagccttcctgcaggaggaggtggagagctaccagagcaagcca
cgggaagtcatgtggcagctgtgtgctatcaaaataacagaggccattcagtatgtggtg
gagttcgccaagcgcatcgatggcttcatggagctgtgtcagaatgatcagatagtgctg
ctcaaagcaggctctttggaagttgtgtttgtcagaatgtgtcgtgcctttgactcgcaa
aacaacacagtctattttgacggaaagtacgccgggccagatgtgttcaagtcattaggc
tgtgacgacttgatcagctccgtcttcgagtttgggaaaaacttgtgttcgatgcacctg
tctgaggatgagatcgccctgttctctgcctttgtgttgatgtctgctgaccgatcttgg
ctccaggagaaggtgaaagtggagaaacttcagcagaagattcagttggctctccagcac
gtcctgcagaagaaccaccgagaggacggcattcttacaaagttgatatgcaaagtgtcg
acactgcgggcgctgtgcagtaggcatacagaaaagcttacggctttcaaagcaatatat
ccagacattgtgcgtgcccacttcccccccttatataaggagctgttcggatcagacttt
gagcagtccatgcccgttgacgggtag
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