Phycodurus eques (leafy seadragon): 133403311
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Entry
133403311 CDS
T09682
Symbol
blm
Name
(RefSeq) recQ-like DNA helicase BLM isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03440
Homologous recombination
pee03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133403311 (blm)
03460 Fanconi anemia pathway
133403311 (blm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pee03032
]
133403311 (blm)
03400 DNA repair and recombination proteins [BR:
pee03400
]
133403311 (blm)
Enzymes [BR:
pee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
133403311 (blm)
DNA replication proteins [BR:
pee03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
133403311 (blm)
DNA repair and recombination proteins [BR:
pee03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
133403311 (blm)
Bloom's syndrome complex (BTR)
133403311 (blm)
FA (Fanconi anemia) pathway
133403311 (blm)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
BLM_N
BDHCT
RecQ_Zn_bind
Helicase_C
HRDC
RQC
ResIII
Motif
Other DBs
NCBI-GeneID:
133403311
NCBI-ProteinID:
XP_061534141
LinkDB
All DBs
Position
5:complement(23110479..23125703)
Genome browser
AA seq
1378 aa
AA seq
DB search
MSSLPQNNLKEQLARHSNAAQSKLSLAKPKSGPFSFKKKSSSGTSWTETSPKVTSQNVLA
SRNVNVPKNSLVTQPVLTFSNKPETSKKSKINNFFSVSSKCKSDISPGSLPDIQRLSSLA
SSGSACPSSPKCDRPLMSTNDSNPVNMDASLGFQIDDWDDMDDFETPTKTKNDSFNRDVS
RTDSRPVVAERSTESTGGQCCVKTDEAQVSPDLSPVGDPDECGLDDSPINTPRGCQPAYL
KSIVSDSEEDSDDMPMTDDKKEWVDPKSIQLDANAEPEDDLDYIPPSPESFYNKSPVDSI
SKPCYAESNDNNLQSKGSNVTPRQTSYDKTIDQLYRIMESICALVDSIPSHELIALSCGN
ELLLKRAQRKRILITGGDAFLRPQQPDSTGISDPSFKDKSSDDASSIFLPMVSKMTPQIR
SSSVISVDCDSDHSDSLIKETPSHSKDGWKSVVEYESICASPSSSISKTSHNSSNVKKTC
TDVDCDDLFFSPKKKTKSQVQIKSNPQANVTATEPIKPDDFFDDFDIDDLNDSDIPDYFD
EPQNSAVPLKTSNTAPKAVKEGGPSRSSWENKPATHVPAPAPKPAKVCSPEPTFRNPAHD
RFRGFTFSHSQEMMKLFHKRFGLHQFRFNQLEAINAAILGEDEFVLMPTGGGKSLCYQLP
ACLSPGVTVVISPLKSLIVDQVQKLTSLDIPATSLSGAKSDGEAGRIYMQLSRKEPIIKL
LYVTPEKVSASNRLISALQNLYERGLLARFVIDEAHCVSHWGHDFRPDYKRLNELRQKFP
KVPMMALTATATPRVRKDILHQLNMTRPQVFTMSFNRANLKYAVLPKKPKKVDEDCVIWI
KKHYPRDSGIVYCLSRNDCDTMAESLQRAGLFALSYHAGLSDGDREYVQFKWINQDGCQV
ICATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGEISHCILFYSYADVHRIK
RIINMDREGDRNTKATHFNNLQSMVQFCENMMDCRRIQLLAYFGEMNFNRGFCKDNPDVT
CDNCSRPNEYKIRNVTEEVKHIVRFVQENCEKVGAKFGRTPKQNRLTLNMLVDIFIGSRT
AKLQTGMFGMGGSYSKHNADRLFKKLVLDNILMEDLYITNGGQAVSYISAGPKALNLLSG
HIQVDFYETESASSVRKNKAAVSRKISVRDQKVQECLKELVDLCKQLGKAFGIHYYNIFS
TATLKKLSERLSSDPDVLLQIDGVTEDKLEKYGAEVLQVLQKYSEWQNPVEQQQAEGGEE
AWIDTTRGREAVEYDDDDSSAYFRSQSAQGQKRKKMPFFKYNKKRKGYGGAGSNSRGRGS
GNNKSWSSRGGGRAGPQSAGRASVRATGDSSAGRTPGFLAVPTPLNQRPFLKPSFSHI
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtcttcctcagaataatttgaaggagcagctggcgagacacagcaacgccgcc
caaagcaaactgtctctggcgaaacctaaatcggggccattttcttttaaaaagaagtcc
tcatcaggtacgagctggacagaaacctcacccaaggtaaccagccaaaacgtcttggca
agcaggaatgttaatgttcctaagaacagtttggtgactcaacctgttctgacattttca
aacaagcccgagacctctaaaaagtccaaaatcaacaacttcttctctgtaagttccaaa
tgtaagtcggacatcagcccgggcagtcttcccgatattcagcgcctgtcatcgttggca
tcttctggcagtgcgtgtccatcttcacccaaatgtgacagaccccttatgagtaccaat
gacagcaaccccgtaaacatggatgcgtcacttggattccagattgacgactgggatgat
atggacgactttgaaacacccaccaaaacaaagaatgactccttcaatagagatgtaagt
aggactgacagcaggccagtcgtagctgaacggagtacagaatccacaggggggcagtgt
tgtgtaaaaacagatgaagctcaagtgagtcctgatctgagtccagttggagatccagat
gagtgtgggctggacgattctccaattaacacaccaagaggatgccagccggcttatctg
aagtctattgttagtgacagtgaagaggacagtgatgatatgcccatgacagatgataag
aaagaatgggttgacccaaagtcaattcagttggatgccaacgccgagcctgaagacgac
ctcgactacataccaccatctcctgagagcttttacaacaaatctcctgtggactccata
tccaagccatgttatgctgaaagcaacgataataatttgcaatccaaaggatctaacgtg
acacctcgtcaaacctcttatgacaagacaattgaccaactctatagaatcatggagtct
atttgtgctctggtggattccatcccgtcacacgagctcattgctctgtcctgtggaaac
gagcttctgctgaagagggctcaaaggaagaggattctcattactggtggtgatgctttc
ctaaggcctcagcagcctgacagcactgggatttctgatcccagcttcaaagacaaatct
tccgatgatgcatccagcatctttttacccatggtttcaaagatgactccgcagatcagg
agctcctcagtcatctctgtggactgtgactctgatcactctgacagccttattaaagaa
accccatcacactccaaggacggctggaaatcagttgtggaatatgagagcatctgtgct
tctccaagctccagcatctcaaaaacatctcacaatagctccaatgtcaagaagacctgc
acagatgtggactgtgatgatctgttcttctcgcccaagaagaagacaaagagtcaagtg
cagattaaatctaatccccaggcaaacgtcacagctacggaacccatcaagcctgatgac
tttttcgacgactttgacattgatgatttaaacgactctgacatccccgactacttcgac
gaaccccaaaattccgcagtgccgttaaagacctccaacactgcgccaaaggctgtgaag
gaaggtgggccgagcaggtcgtcatgggagaacaaacctgcaacgcatgtgcctgcacct
gcacccaaaccagcaaaggtctgctctcctgaacccaccttccgaaacccggcacacgac
cgtttcagagggttcaccttctcccattcgcaggagatgatgaagctcttccacaagcgc
tttgggctccatcagttccggtttaaccagctagaagccattaatgccgccatcctcggg
gaagatgagtttgtgctcatgcccacaggtggcggtaaaagtctgtgctaccagcttcct
gcctgtctgtcaccgggagtcactgtggtcatctcgcctctcaaatctctcattgtggat
caagtccagaagctcacgtcactggatatcccagcaacaagcctgtctggtgctaaaagt
gacggcgaagcagggaggatctacatgcagctctccaggaaggagcccatcattaaactc
ctctacgtcacgcctgaaaaggtcagtgccagtaatagactcatctcagccctacagaac
ctgtacgagcgaggcctcttggctcgctttgtcatagacgaggctcattgcgtcagtcat
tgggggcacgacttccggccagattacaagaggctgaacgaactgcgtcagaagttcccc
aaagtgcccatgatggcgttgacagccacagccaccccccgcgtgcggaaggatatcttg
caccaactcaacatgacacgccctcaggtcttcaccatgagctttaaccgagcaaacctt
aagtacgctgttctgcccaagaaacccaaaaaggttgacgaggactgtgtcatttggatc
aagaagcactacccacgtgattcaggcatcgtgtactgtctgtcccgaaacgactgcgac
accatggccgagagcctgcagcgagccggcctgtttgcgctgtcctatcacgctggcctg
agtgacggcgacagagagtacgtgcagttcaagtggatcaaccaggacggctgccaggtc
atttgtgccaccattgctttcggcatgggcatcgacaagcctgacgttcgctacgtgatc
cacgccagtctgcctaaatcagtggagggctactaccaagagtcagggagggccggcagg
gacggggagatctcacactgcatcctcttctacagctacgccgatgtgcaccgcatcaag
aggatcatcaacatggaccgagaaggtgacagaaacaccaaggctactcacttcaacaac
ctacaaagcatggtgcagttctgcgagaacatgatggactgcagaaggattcagctgctg
gcctactttggagagatgaacttcaacaggggcttctgtaaggacaaccctgacgtcacc
tgtgacaactgtagcagaccaaatgaatacaaaattaggaatgtcactgaagaagtgaag
cacatcgtgaggttcgtccaggagaactgtgagaaggtcggagccaagttcggccgaacc
cctaagcagaaccgcctgacgctcaacatgctggtggacatcttcataggttccagaacc
gctaagctccagacgggcatgtttggaatgggaggctcttattccaagcacaacgcggac
cgcctgttcaaaaaactggtgctcgacaacatcctgatggaggacctttacatcaccaac
gggggtcaagctgtgtcgtacatctctgcgggaccaaaagctctcaacctcctgtccgga
cacatacaggtggacttctatgagacagagagcgcctccagcgtgaggaagaacaaagct
gcggtgtccaggaagatctctgtgagggaccagaaggttcaggagtgtctcaaggagctg
gtggatctctgcaagcagctgggaaaagccttcggaattcactattacaacatcttctcc
actgccaccttgaaaaagttatctgagaggttgtcctccgacccggacgtcctgctgcaa
atcgacggtgtgactgaggacaagctggagaagtacggggctgaggtgctccaggtcctg
cagaagtactccgagtggcagaatcctgtcgaacagcagcaggctgagggcggcgaagag
gcctggatcgacacaacacgaggccgcgaggccgtggaatatgacgacgacgactcctcc
gcctacttccgcagccagagcgcgcaggggcagaagaggaagaaaatgcccttcttcaag
tacaacaaaaagagaaaaggatacggaggcgcaggctccaactcgagaggccgaggctcc
ggcaacaataagtcatggtcctcgagaggggggggcagagccggtcctcagtctgccggc
cgagcgtccgtccgtgcgacaggtgactcgtcagcaggaaggacgccgggcttcctggcg
gtgcccacgcctctgaaccagcgaccttttctcaagccgtccttctctcatatatag
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integrated database retrieval system
